LOCUS BC016475 2340 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serum deprivation response (phosphatidylserine binding
protein), mRNA (cDNA clone MGC:8984 IMAGE:3882155), complete cds.
ACCESSION BC016475
VERSION BC016475.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2340)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2340)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66346738.
FEATURES Location/Qualifiers
source 1..2340
/db_xref="H-InvDB:HIT000037581"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8984 IMAGE:3882155"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2340
/gene="SDPR"
/gene_synonym="PS-p68"
/gene_synonym="SDR"
/db_xref="GeneID:8436"
/db_xref="HGNC:HGNC:10690"
/db_xref="MIM:606728"
CDS 140..1417
/gene="SDPR"
/gene_synonym="PS-p68"
/gene_synonym="SDR"
/codon_start=1
/product="serum deprivation response (phosphatidylserine
binding protein)"
/protein_id="AAH16475.1"
/db_xref="GeneID:8436"
/db_xref="HGNC:HGNC:10690"
/db_xref="MIM:606728"
/translation="MGEDAAQAEKFQHPGSDMRQEKPSSPSPMPSSTPSPSLNLGNTE
EAIRDNSQVNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSK
YQASTSNTVSKLLEKSRKVSAHTRAVKERMDRQCAQVKRLENNHAQLLRRNHFKVLIF
QEENEIPASVFVKQPVSGAVEGKEELPDENKSLEETLHTVDLSSDDDLPHDEEALEDS
AEEKVEESRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLT
SNHQKISSGKSSPFKVSPLTFGRKKVREGESHAENETKSEDLPSSEQMPNDQEEESFA
EGHSEASLASALVEGEIAEEAAEKATSRGSNSGMDSNIDLTIVEDEEEESVALEQAQK
VRYEGSYALTSEEAERSDGDPVQPAVLQVHQTS"
BASE COUNT 759 a 535 c 562 g 484 t
ORIGIN
1 gtctgaacct ctgccagtcc tggagactgg tgccctgagc tccaaccagc gggcctcatc
61 ctacaccctc accaccgcaa cttctcaccc gagcaagaag cagctcccag agagaaagaa
121 cgttcccacc tgcctagcca tgggagagga cgctgcacag gccgaaaagt tccagcaccc
181 tgggtctgac atgcggcagg aaaagccctc gagccccagc ccgatgcctt cctccacacc
241 aagccccagc ctgaacctag ggaacacaga ggaggccatc cgggacaact cacaggtgaa
301 cgcagtcacg gtgctcacgc tcctggacaa gctggtgaac atgctagacg ctgtgcagga
361 gaaccagcac aagatggagc agcgacagat cagtttggag ggctccgtga agggcatcca
421 gaatgacctc accaagctct ccaagtacca ggcctccacc agcaacacgg tgagcaagct
481 gctggagaag tcccgcaagg tcagcgccca cacgcgcgcg gtcaaagagc gcatggatag
541 gcagtgcgca caggtgaagc ggctggagaa caaccacgcc cagctcctcc gacgcaacca
601 tttcaaagtg ctcatcttcc aggaggaaaa tgagatccct gccagcgtgt ttgtgaaaca
661 gcccgtttcc ggtgccgtgg aagggaagga ggagcttccg gatgaaaaca aatccctgga
721 ggaaaccctg cacaccgtgg acctctcctc agatgatgat ttgccccacg atgaggaggc
781 cctggaagac agtgccgagg aaaaggtgga agaaagtagg gcagagaaaa taaaaagatc
841 cagcctgaag aaagtggata gcctcaagaa agcattttct cgccagaaca tcgagaaaaa
901 gatgaacaag ctggggacaa agatcgtatc tgtagagagg agagagaaga ttaagaaatc
961 tctcacgtca aatcaccaga aaatatcctc aggaaaaagc tcccccttca aggtttctcc
1021 cctcactttc gggcggaaga aagtccgaga gggagaaagc catgcagaaa atgagaccaa
1081 gtcagaagac ctgcctagca gtgagcagat gccaaatgac caggaagagg agtcctttgc
1141 agagggtcat tccgaagcgt ccctcgccag cgctctggtg gaaggggaaa ttgcagagga
1201 ggctgctgag aaggcgacct ccagggggag taactcgggg atggacagca acatcgactt
1261 gactattgtg gaagatgaag aggaggagtc agtggccctg gaacaggcac agaaggtacg
1321 ctatgagggt agctacgcgc taacatccga ggaggcggag cgctccgatg gggaccccgt
1381 gcagcccgcc gtgctccagg tgcaccagac ctcctgagct tagagccacc gtgccatcct
1441 gtgctgtgct caagcgggca gccagggctg aagaacaaac tcttgcacat ctccagcacg
1501 actcacccac tcctgcgttc ctgtccaggc agtaatcatt gaccatatag tcatagtaag
1561 acacacgaga ccaggcttta ccatgaaagc gacctgtcac ggactccact tttaatttgc
1621 tcttaggttc tatctctgta gaatgtctcc aagattgaag aagaaactga gcagttgaaa
1681 aatgctaatc tctttgactt agtcagaaaa aaacagagga taattaagat actagtcatg
1741 aaaagtgatt cattcttttt tgtcattcca taagcttgct gaatagtgta ccggtaatat
1801 attgtatttc caccgtactc tgtgaatcta attattattc tttaagtgtt gatatataat
1861 atacataaat atgtaagcta aacatataac tatatgtttt aagaagaaaa catctacgaa
1921 aggtaaaaag agatgatcag ttggttgttt acttgctaga aaccattgtt ttattgcaaa
1981 cgaaggaaaa atgaagagat tataaaagtc agctaatgaa gtaagatacg tagtaaagtc
2041 aggactattc aaaaagtaag aaagaaaatt tggaaaatga gagaaacagg aaacaaagaa
2101 tgccgaaaag aatgaaaaca gagaaaaaat gtatgtgctt gaaagtaaaa tacttacaat
2161 agtagcttaa ctatttcact ctttaaataa aaatactaaa gaagttcgta tatcctggaa
2221 taacatgtca tcttcaaaat atttttattt tctaatattt ttaataataa acattttata
2281 gtgttaaagc tgtatttttc ttaataaata aaggacatta caaataaaaa aaaaaaaaaa
//