LOCUS       BC016465                5100 bp    mRNA    linear   HUM 21-JUL-2006
DEFINITION  Homo sapiens tetratricopeptide repeat domain 28, mRNA (cDNA clone
            MGC:18145 IMAGE:4154050), complete cds.
ACCESSION   BC016465
VERSION     BC016465.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5100)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 5100)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 19 Row: n Column: 12.
FEATURES             Location/Qualifiers
     source          1..5100
                     /db_xref="H-InvDB:HIT000037575"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:18145 IMAGE:4154050"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..5100
                     /gene="TTC28"
                     /gene_synonym="KIAA1043"
                     /db_xref="GeneID:23331"
                     /db_xref="HGNC:HGNC:29179"
     CDS             368..4132
                     /gene="TTC28"
                     /gene_synonym="KIAA1043"
                     /codon_start=1
                     /product="TTC28 protein"
                     /protein_id="AAH16465.1"
                     /db_xref="GeneID:23331"
                     /db_xref="HGNC:HGNC:29179"
                     /translation="MVNGQRGLVLYYSLAAGYLYSWLLAPGAGIVKFHEHYLGENTVE
                     NSSDFQASSSVTLPTATGSALEQHIASVREALGVESHYSRACASSETESEAGDIMDQQ
                     FEEMNNKLNSVTDPTGFLRMVRRNNLFNRSCQSMTSLFSNTVSPTQDGTSSLPRRQSS
                     FAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEY
                     LYERFGLLAVPSIRSLSVQSKSHLRKNPPTYSSSTSMAAVIGNPKLPSAVMDRWLWGP
                     MPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTPS
                     MDGNPASSKSSFGHPYTIPESLRVQDDASDGESISDCPPLQELLLTAADVLDLQLPVK
                     LVVLGSSQESNSKVTADGVIALTRAFLAAGAQCVLVSLWPVPVAASKMFIHAFYSSLL
                     NGLKASAALGEAMKVVQSSKAFSHPSNWAGFMLIGSDVKLNSPSSLIGQALTEILQHP
                     ERARDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLD
                     PPTSGLPAAVFFPTSDPGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQLISR
                     AVKNMVGMLHQVLVQLQAGEKEQDLASAPIQVSISVQLWRLPGCHEFLAALGFDLCEV
                     GQEEVILKTGKQANRRTVHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNA
                     LPLGYQQPPFSPTGADSIASDAISVYSLSSIASSMSFVSKPEGGSEGGGPGGRQDHDR
                     SKNAYLQRSTLPRSQLPPQTRPAGNKDEEEYEGFSIISNEPLATYQENRNTCFSPDHK
                     QPQPGTAGGMRVSVSSKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSST
                     ETDSTVKSQEESNPKLDPQELAQKILEETQSHLIAVERLQRSGGQVSKSNNPEDGVQA
                     PSSTAVFRASETSAFSRPVLSHQKSQPSPVTVKPKPPARSSSLPKVSSGYSSPTTSEM
                     SIKDSPSQHSGRPSPGCDSQTSQLDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSP
                     AGSAPSPALSYSSAGSARSSPADAPDIDKLKMAAIDEKVQAVHNLKMFWQSTPQHSTG
                     PMKIFRGAPGTMTSKRDVLSLLNLSPRHNKKEEGVDKLELKELSLQQHDGAPPKAPPN
                     GHWRTETTSLGSLPLPAGPPATAPARPLRLPSGNGYKFLSPGRFFPSSKC"
BASE COUNT         1219 a         1506 c         1273 g         1102 t
ORIGIN      
        1 gttagctgag caactgggcc gaagagaaga tgaggcaaaa attcgccatg gccttggcct
       61 ctccctttgg gctagtggaa acttggagga ggcccaacac cagctttata gggcatcagc
      121 cttgtttgaa acaatccgac atgaggcaca gctgagcacg gactacaaac tctccctctt
      181 tgacctgcag acatcatcct accaggcctt gcagcgggtg ctcgtcagcc taggccatca
      241 tgatgaagcc ctggctgtgg cagaaagggg acggacaagg gcatttgctg atcttctggt
      301 ggaacgacaa acaggacaac aagactccga cccctactcc ccagtcacta ttgatcagat
      361 cttagagatg gtaaatggcc agaggggact agtgctttac tattccctgg ctgcaggcta
      421 tctgtatagc tggctgctgg ctcctggggc aggaattgtg aagtttcatg aacactacct
      481 gggtgagaac acagtggaaa actcaagtga cttccaggcc agcagcagtg taacccttcc
      541 aacagcaacc ggctcagccc tggagcagca cattgccagt gtccgggagg ccctgggggt
      601 ggagtctcac tactcaaggg cctgtgccag cagtgagaca gagagtgaag cgggagacat
      661 catggaccag caatttgaag agatgaacaa caaactcaac tcggtcactg accccactgg
      721 ctttctgcgg atggttcgcc gcaataacct gtttaacagg agctgccaga gcatgacgag
      781 cctgttcagt aacactgtgt caccgaccca ggacgggacc tcctctcttc ccaggaggca
      841 gagctcgttt gccaagcccc cgctccgtgc cctgtatgac ctgctcatcg cgcccatgga
      901 agggggcctg atgcactcca gcggccccgt gggccggcac cggcagctca tcctggttct
      961 ggagggggag ctctacctca ttcctttcgc cctcctgaag ggaagctcct ccaatgagta
     1021 cctctacgag cgcttcggcc tccttgctgt cccttccatc cgctccctca gcgtgcagtc
     1081 caagtctcac ttacggaaga acccgcccac atactccagc tccacatcca tggcggctgt
     1141 catcggcaac cccaagctac catcggccgt gatggacagg tggctgtggg ggcccatgcc
     1201 atcggccgag gaagaggcct acatggtgtc cgagctgctg ggctgccagc ccctagtggg
     1261 cagtgtggcc accaaggaga gggtcatgag tgccctgacc caggctgaat gcgtccactt
     1321 tgccacccac atctcctgga agctgtcggc cttggtcctc acgcccagca tggacggcaa
     1381 ccctgccagc agcaagagct ccttcggcca cccctacacg atccctgagt ccttgcgggt
     1441 gcaggacgat gccagtgatg gggagagcat ctcggactgc ccgcccctgc aggagctgct
     1501 gcttactgcc gccgacgtcc tggacctgca gctgcctgtg aagctggtgg tgcttggctc
     1561 ctcccaggag tccaacagca aagtcacagc cgacggggtc atcgcgctga caagggcctt
     1621 cctggctgcc ggcgctcagt gtgtcctcgt gtctctgtgg cctgtgccag tggctgcttc
     1681 taagatgttc atccatgcct tctactcatc cctgctgaac ggcctgaaag ccagcgccgc
     1741 cctgggggag gccatgaagg tggtgcagag cagcaaggcc ttctcgcacc cctccaactg
     1801 ggcagggttc atgctcatcg ggagtgacgt taagctgaac agcccctcat cactcatcgg
     1861 ccaggccctc acagagatcc tgcagcaccc ggagcgtgcg cgggacgccc tgcgagtgct
     1921 gctgcacctg gtggagaaat ccctgcagcg catccagaat gggcagcgca atgccatgta
     1981 cacatcccag cagagtgtgg agaacaaagt gggcggcatc cctggctggc aggccctcct
     2041 caccgctgtg ggcttccggc tggacccccc aaccagtggc ctgccagcgg ctgtcttctt
     2101 cccaacctcc gacccgggcg accggctcca gcagtgcagc agcacactcc agtccctgct
     2161 gggtctgccc aatcctgccc tccaagccct ttgcaaactc atcactgcct ccgagacggg
     2221 cgagcagctc atcagccggg ctgttaaaaa tatggttgga atgctccacc aggtgctggt
     2281 tcagctccag gctggcgaga aggagcagga cttggcatca gctcccattc aggtctccat
     2341 cagcgtccag ctgtggcggc tcccgggatg ccacgagttc ctggcagctc taggttttga
     2401 tctctgtgaa gttggtcagg aggaagtaat cctgaaaacc gggaagcaag ctaatcgacg
     2461 gactgtgcac ttcgcgctcc agtccctgct gtctctgttt gattctactg agctacccaa
     2521 gcgcctcagc cttgacagct cctcctccct cgagtctctt gcttctgctc agtctgtttc
     2581 caacgccctg cccttgggtt accagcaacc ccccttctct cccaccggtg cggacagcat
     2641 cgcctcagat gccatctctg tgtacagtct gagctccatt gcctcctcaa tgagctttgt
     2701 ctccaaaccc gagggtggat cagagggtgg aggccccgga ggacggcagg accatgaccg
     2761 gtccaagaac gcttacctgc agagatccac cctgcctagg agccagctgc ctccccagac
     2821 ccgccctgca ggcaacaaag atgaagaaga atatgaaggg ttttctatca tcagtaacga
     2881 gcccttggcg acctaccaag aaaaccgaaa cacatgcttc tcaccagacc acaaacaacc
     2941 ccaacctggg acagccggag gcatgagagt ctcggtgagc tccaaaggga gcatcagcac
     3001 tccaaattct ccagtgaaaa tgactctgat tcccagcccc aactcaccct tccaaaaggt
     3061 gggaaaacta gcaagctcag atacaggaga atcagaccag tctagcacag aaacggacag
     3121 taccgtgaaa tcccaagaag aaagcaaccc aaaactggat ccacaagagt tagcccagaa
     3181 aattctggag gagacacaga gtcatctcat tgcggtggag cgtcttcaga ggagcggcgg
     3241 ccaggtgagc aagagtaata accctgaaga cggcgttcag gcgcccagca gcactgctgt
     3301 cttcagagcg tcagaaacca gtgcgttcag caggcctgtt ctctcccatc agaagagtca
     3361 gccatcacca gtcactgtta aaccaaagcc cccagccagg agctcctccc tgcccaaggt
     3421 gagttccgga tatagcagcc ccaccacctc agagatgtcc atcaaagaca gcccgagcca
     3481 gcacagtggc cggccatcgc ccggctgcga ctcacagact tcccagctgg accagcctct
     3541 ctttaaactg aagtacccca gctctcctta cagcgctcac atttccaaat caccaaggaa
     3601 catgtcccca agctccggcc accagtctcc tgctggcagt gcaccctccc cagctctctc
     3661 ctactcctca gctggatctg ctcgctcaag tccagcagac gctcccgaca tagacaaact
     3721 gaaaatggca gccattgatg aaaaggtgca ggctgtccat aacctgaaga tgttctggca
     3781 gagcacaccc cagcattcca cagggccaat gaagatcttc cggggggctc ctggcacgat
     3841 gacttccaaa agggatgtcc tcagtctgtt gaatttgtca ccacggcaca ataagaagga
     3901 ggagggagtg gataagcttg aactgaagga gctgtccctg cagcagcatg acggagctcc
     3961 accgaaagcc cctcccaacg gacactggcg caccgagacc acctcgctgg gctcactgcc
     4021 gctgcccgcc ggccctcccg ccacagcccc cgcgcgccct ttgaggcttc cttctggaaa
     4081 tggctacaag ttcctgtctc caggaagatt tttcccttct tccaaatgct aaagcatctt
     4141 ttatacccac tgactctgag cagcctgcag atgggggcct ggcgtttgct tcagcccttc
     4201 cctgagtgca gtccccccac agccaccagc accctcatga tgctgtgctc tgcaggcgag
     4261 gggcaccacc acgtccaaag gctgccacac acactggtgg cttttctggg ccacattcac
     4321 caaaagccag gacttctgtg gggctggtac aggaggctca tggaatttcc tacacacttc
     4381 accaaatgtt tgtttacctt tgaactccct gcttctcatc tttgatatga ttcttcacca
     4441 ggattttgta caaaaatgat catggttctg gggtggggag aggaaaggga gcacatattt
     4501 tgctaagagg tatatatgca gtacctttta tacacagaaa tacaaataga gctttttcta
     4561 aggctttcgg ttgctggttg ggggtgggat atatgaaatt tcagttgaat tctacaggaa
     4621 agtgttatat tagccaaaaa cagaaaaatg gtttttaaaa tgccaatgat ttgtaattaa
     4681 attgtagcaa ttttggtctc atgatagtgt aatatctcag caacaatgca ataattcaca
     4741 ttgaaacagc gcttccattc tgaactctgc tctgcaaatg tcttttgggt cccgctgtca
     4801 accaaacttg aattttctta aaaaaaaaat tatgtaactc ttatccaggc attttagaac
     4861 tatgcaattg tgatttaaaa tgcaactttg tgcttttaaa acattattga ccttttttgt
     4921 atatggataa acaacttggt tttattatca atagtacttt gcatttatag ctattatttt
     4981 taaaagctca aaaagttttt taaaatgtca aattttgaat agtcatcaat aagtaattat
     5041 caagtttgga aggaaaggtt gaaatgactc cgtttcctta taagcaaaaa aaaaaaaaaa
//