LOCUS BC016439 2330 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens leucine rich repeat containing 56, mRNA (cDNA clone MGC:16772 IMAGE:3447051), complete cds. ACCESSION BC016439 VERSION BC016439.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2330) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2330) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: i Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39930570. FEATURES Location/Qualifiers source 1..2330 /db_xref="H-InvDB:HIT000088993" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16772 IMAGE:3447051" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2330 /gene="LRRC56" /gene_synonym="DKFZp761L1518" /gene_synonym="FLJ00101" /db_xref="GeneID:115399" /db_xref="HGNC:HGNC:25430" CDS 265..1668 /gene="LRRC56" /gene_synonym="DKFZp761L1518" /gene_synonym="FLJ00101" /codon_start=1 /product="LRRC56 protein" /protein_id="AAH16439.1" /db_xref="GeneID:115399" /db_xref="HGNC:HGNC:25430" /translation="MCVDTREGSLGNFGVHLPNLDQLKLNGSHLGSLRDLGTSLGHLQ VLWLARCGLADLDGIASLPALKELYASYNNISDLSPLCLLEQLEVLDLEGNSVEDLGQ VRYLQLCPRLAMLTLEGNLVCLQPAPGPTNKVPRGYNYRAEVRKLIPQLQVLDEVPAA HTGPPAPPRLSQDWLAVKEAIKKGNGLPPLDCPRGAPIRRLDPELSLPETQSRASRPW PFSLLVRGGPLPEGLLSEDLAPEDNTSSLTHGAGQVLCGNPTKGLRERRHQCQAREPP EQLPQHRPGDPAASTSTPEPDPADSSDFLALAGLRAWREHGVRPLPYRHPESQQEGAV APWGPRRVPEEQVHQAEPKTPSSPPSLASEPSGTSSQHLVPSPPKHPRPRDSGSSSPQ WSTDLQSRGRRLRVLGSWGPGLGDGVAAVPVLRALEVASGLSPRAQGCPGPKPAPHAA ARPPRAAELSHPSPVPT" BASE COUNT 432 a 769 c 756 g 373 t ORIGIN 1 cgtctgcatc tttaaggggc aacaccaggt gacatgtgaa tggatctggg ctgggacaga 61 tcccgtgggc ctcggcggag cacctccagc gtccgggtgc gggagctgag ctggcaaggc 121 ctgcacaacc cctgcccaca gagcaagggc cctggcagtc agagggacag acttggagag 181 cagctggtgt aagagtacct gtcccctgcc cggctgcagg ccctggcccg ggtggatgac 241 cttcggctgg tgaggacgct ggagatgtgt gtggacactc gtgagggcag cctggggaac 301 tttggggtgc acctgcccaa cctggaccaa ctgaagctga acggcagcca cctgggctcc 361 ctgagggact tgggcacgtc tctgggccac ctgcaggtgc tgtggctggc tcgctgtggc 421 cttgctgacc tggatggcat cgcctctttg ccagcactta aggaactcta cgcctcctac 481 aacaacatct cggacctgag cccactgtgc ctgctggaac aattggaggt gctggacctg 541 gagggcaaca gcgtggagga cctggggcag gtgcgctact tgcagctgtg cccacgcctg 601 gccatgctca ccctggaggg caacctggtg tgcctacagc cggcccctgg ccccaccaac 661 aaggtgccca ggggctacaa ctacagggca gaggtgagga agctcattcc ccagctgcag 721 gtcctggacg aagtgccggc cgcacacaca ggcccaccgg cccccccacg gctgagccag 781 gactggcttg cggtgaagga ggccatcaag aagggcaacg gccttccccc gctggactgt 841 ccccgtggag cccccatccg gagacttgac cccgagctgt ccctgcctga gacgcagtcc 901 cgggcctcca ggccctggcc cttctccctg ctggtccgtg ggggccccct gcctgaaggc 961 ctgctttctg aggacctggc cccagaagat aacaccagca gcctcaccca tggtgctggc 1021 caagtcctct gtgggaaccc caccaagggc ctgcgggagc gtaggcacca gtgccaggcc 1081 agggagcccc ccgagcagct gccccaacac aggccaggag atccggccgc cagcacttcc 1141 accccagagc ctgaccctgc agacagctct gacttcctgg ccttggctgg gctcagggcc 1201 tggagggaac atggcgtgcg ccccctcccc tataggcacc cggagtccca acaggaaggg 1261 gctgtagccc cctggggccc acggagggtc cctgaagagc aagtgcacca ggcagagccc 1321 aagactccct ccagcccccc aagcctggcc tcagagccct ccgggacctc gagccagcac 1381 ctggtccctt cacctcccaa gcacccaagg ccacgagatt ctggcagcag ctccccgcag 1441 tggtcgacag acctgcagtc cagggggcgt cggctccgag tcctgggcag ctgggggcct 1501 ggcctgggtg atggggtggc tgcagtgcct gtcctgagag ccctggaggt ggcctcaggc 1561 ctgagccctc gagcccaggg atgtcctggc ccaaagccag caccacatgc agcagctaga 1621 cctcccaggg cagctgaact ctctcacccc agccccgtcc ccacttaata tagcccccac 1681 tgccaggctt gcctgtgctg gggccacgac ttgcccacat atgtggtcac agagcacaga 1741 atacctgggc gggtgtgttg gggggtggaa ggagtgcctg gccctgggga ggaccctctt 1801 ggtggagggg agtgggggac tgggaccagc cagggaggca gcagaggctg gaacccagtt 1861 taggccccca actgggtttg gcctggggag ggagggtccg gctccccagc ccttccttag 1921 ggccaggctt tcccgcgggc acgggggtgg ggggtggtca cccgagcagg cctgtgagag 1981 gcctctcctg ctagaattgg gcatggccga ggggcagggg ctggagctgc gagtccacca 2041 ctcccttgcc ggccccaggg taagagccac ctcctaggcc gcagtggccc aaggtcccag 2101 ctgctcgcct gaggccgccg ggggtgcggt ccaggcctcc cgtctccggg ggatctgtag 2161 ggttcccgca ctgcgatagg gcggcccgtt ccctcctctt ggcgcaggac gccccggaac 2221 ccaaaccaac atttccagct ctcaggtgta cagaaatgcg gtttactttg taggccacgt 2281 tggttcaata aatgatgcag cggaaaaaaa aaaaaaaaaa aaaaaaaaaa //