LOCUS BC016405 2001 bp mRNA linear HTC 11-SEP-2007 DEFINITION Homo sapiens chromosome 1 open reading frame 61, mRNA (cDNA clone IMAGE:4157438), with apparent retained intron. ACCESSION BC016405 VERSION BC016405.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2001) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2001) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: f Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5453624 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..2001 /db_xref="H-InvDB:HIT000088991" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4157438" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 508 a 477 c 476 g 540 t ORIGIN 1 aaacggtaat tcttagattg cagaaaggtt aaaggctaca gtttggaaag actgatagca 61 tatgatttgt ttcagaatgt aaaaagggca gctctctggc atgttcctga ctgaggatct 121 cataacattt aacttgagga acttcctcct tttccagctt tgggagtcaa ggtgagactc 181 ctggggacct aggtaggaag tatctgaaga cttgggagag gaggcacagt ccttgggaag 241 cctgataaag ggaagaggtt ggagtccgcg tggcagaatg gccgttgttt tctttctcct 301 taatggatat taagacttat tggtaacagc acttaggatg ggtaaactga cttacataga 361 taaatacaga atgtgtaaat gataatttca agtttatgcc attaagctcc tggattctaa 421 gtaactaaaa acacagttta ttaaattaaa ggacaagtta ggtagtggct ataattaaca 481 aatcctatag agacctgcct atcagcatgt agacttgtct tcataattga gtgactttaa 541 gaagggatgt cttctctccc ttcgcctcac aaaccaacat ccccccagtc cccagtgcga 601 ttcctaaggt tggtaaccca ccagagtcac acaggcccct atgtctgaaa gtctttcttg 661 aagtctgcat gttcaaggtt tgaaagttgg aatctggtta tttatttttt caccttcctt 721 cactccaatg ttctgggtat ggattgacct tcccacctcc cttcctttgc tattgggacc 781 tcagaggtct tgaggggtga gtatgtctca tccagagaca gggtgtgctg acttccctag 841 gagatcatga gtttaggtta atgctttaaa atcactggag aagcagacaa aactataaaa 901 acattcttgg ggctttgagg agaatgagga gcagagttat ggaaggaagg gtgggtgggt 961 gcatatttag ataggagaga gaaggggaaa gggggaaccc cctccttgcc acccaggctc 1021 tcccagggcc aaagtgacac cccctcctcc tcctgcccta atccccccat taaggcagct 1081 ctgagtttgt tatgacaggg gctgaaggct gctgaattgc tgtttgctgt gtctgctaat 1141 tggactgaag ggttggagtc tggacactga aagggaccat tgttgctgtt taccttctac 1201 agccgcctcc ctggggaccc tctgggtaaa ggggagcagc agcaccccct tagggtcatt 1261 gcacccattt cctgcacaag ggactgcggt ggggagacag tttgtctcat tgccttgggg 1321 tggtttgagc ttctacagca cagaggagac aagccaacac ctgagccagt ctcttctcca 1381 ggccaggcct aggggccatc caggagctcc caggaaagag gatttacatg cttgtctttc 1441 tcctttttat tcattccctt cttctttagg gatctttgct ttgcctcttc ctccagctaa 1501 tcaggcttca cccctgcacc ttttctgacc tgctttcttc tagcttctca cctggggcgg 1561 gtgggttctg caccaccctc ccaccctcct tcctccgtgt ggacgataga gccacatcca 1621 gcaccacgga cagctcccgg gcgaccaaaa agaagaatgt acttcatctg gttgggctgg 1681 attccctctg ataagccttc ccagttgact gaaagatgag gctaggctct agcaagttga 1741 agtcaaacca gctccttcaa gaagctttga gcagaatgaa gtggggagga cccagcttcc 1801 agcccaggaa gcccactgta cctggagcca tctgggataa gactttgacc catgactccc 1861 atatccacag cctgtccatc ctagcccatc ccagtttatc ctgtatcatt tgagctggga 1921 ttcccacatc ctctgagttg gaagtcccat ctcaagtctt caataaagac tcttgaatat 1981 tgaatcaaaa aaaaaaaaaa a //