LOCUS BC016390 2227 bp mRNA linear HUM 20-AUG-2003
DEFINITION Homo sapiens pogo transposable element with KRAB domain, mRNA (cDNA
clone IMAGE:3863491), partial cds.
ACCESSION BC016390
VERSION BC016390.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2227)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: i Column: 6.
FEATURES Location/Qualifiers
source 1..2227
/db_xref="H-InvDB:HIT000037565"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3863491"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 625 a 500 c 457 g 645 t
ORIGIN
1 ggtgctggat gtcgtggtct acaagccact gaatgacagt gtgcgggccc agtactccaa
61 ctggcttctg gctgggaacc tggcgctgag cccaaccggg aatgctaaga agccacccct
121 gggcctcttt ctggagtggg tcatggtcgc gtggaatagc atctcaagtg agtccatcgt
181 ccaagggttc aagaagtgcc atatctccag caacttggag gaggaagacg atgtcctgtg
241 ggaaatcgag agtgagttgc caggaggagg agaaccacca aaagattgtg acaccgaaag
301 catggctgag agcaactgaa gggaaaggga aagcaaatgg aactctgatt taaacagctg
361 gggatgaaat tcctcaagat gattattcct gaaagtgtgg atgcgctgga tgcgcaggga
421 acatcaggaa aaggccacgg ggctctgaac agccccggtc cagacagcag cctgtacatc
481 catcccagga cacagcccag cccctcccca caccatacaa ggtatcagaa aagtctagga
541 cctatcattt catcagagac atgatcagaa aagaaactgc ttctgcccca tttcttgttt
601 tggagattac tccatctgtc catcaaaaga aacctgtaaa tatgaaagaa caaaggttat
661 ttcctggaga aaagacaatt tattcaacac caacgaggga ctcatcatat gggcacaact
721 ctggtgtcct tctatggaga aaacctcaag taaagtttta ttctgccttt gaaaatgctt
781 ccaaaagtag accctgtccc cacacaggtc aagactacag agaaggcttt gtagaaatgt
841 gtcacctatg tacacctgct acttacacat ttcctctttt ggaaaaatga gatacttaga
901 ataacaagaa aattaagaca tactggcctg gtgccagcag atggcttttc tatagacaaa
961 ctaggttagt gtggaagata taggttaaaa taaactatgc tgttttattt atcttcccaa
1021 cctgattggc agctagactt ttttagggtc tcatttaatg gccctgtttt tttcattatt
1081 atatttaatg atagggcagg atttcgtatg caagctcttg tttctcaggc tgcctgcaga
1141 agaagtcgct ataaattatc tgttgtctac atggtacaag gcccattgac tcatctgatg
1201 cttgttttgt taatttcttt aatattttta tcacggggca gtgggagggc ttgggctttt
1261 agccacagct gttttaagac ttctgatctc ctgccctgca ggaataggtg ggaagtcatt
1321 gaatttttac actatagtaa tttgcattcc cacataagtt tgagtgttac gaaaacattc
1381 ctttaaaggg atctgtgcta cacaaaatat gccaggacct cacagacaaa gccattgcta
1441 gaaatgtcat tccaatgatc agatctggaa acaggctgcc ataaccactt ttccttcttg
1501 tagactcagc tcacctgtat atttaaactg ttcttggcat cttgaaacac ctatttctac
1561 tcaggtactc attgtcctgt tactgattca cctttctgat ccttttcaac cagttttccc
1621 ccaagggggg aaattttact taacctctag tatttgaaca actcaatatt tgaattgttg
1681 ccccatttgc ttttacctgt actgtattct tggtcatctc aaatggcgtc taaacccagc
1741 tactttgcat tccagaagtt tccattccct ccaattccac ctaatttttc atctgtccta
1801 gttactggct ctttcttcat gtcttatttc tcttgctttg ggagcttaaa agattttaca
1861 agacctaatt ttgggttcct tccttggagc catagttacc ctgccaagaa gagtagaaaa
1921 tgggttcaac tcctgtttcg ctccaccaac acctctgtga gtctcatcat cagctgagcg
1981 atgatgcctt acaggttgca tagcactgga actttcctag agtaacggct ctgctgccag
2041 ggtttctctg ggctcattct tccactgact taattatgat ctatgcctaa cagagcccca
2101 gtacaactat tttgcagaat ggctgttacc ctagaattac tatagcacat attgagatat
2161 agttgtactc cctagtagat aggaactgac cccaacaata aactttgata ataaaaaaaa
2221 aaaaaaa
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