LOCUS BC016383 3366 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens MAM domain containing 2, mRNA (cDNA clone MGC:27424
IMAGE:4696722), complete cds.
ACCESSION BC016383
VERSION BC016383.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40538801.
FEATURES Location/Qualifiers
source 1..3366
/db_xref="H-InvDB:HIT000088978"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27424 IMAGE:4696722"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..3366
/gene="MAMDC2"
/gene_synonym="MGC21981"
/db_xref="GeneID:256691"
/db_xref="HGNC:HGNC:23673"
CDS 336..2396
/gene="MAMDC2"
/gene_synonym="MGC21981"
/codon_start=1
/product="MAM domain containing 2"
/protein_id="AAH16383.1"
/db_xref="GeneID:256691"
/db_xref="HGNC:HGNC:23673"
/translation="MLLRGVLLALQALQLAGALDLPAGSCAFEESTCGFDSVLASLPW
ILNEEGHYIYVDTSFGKQGEKAVLLSPDLQAEEWSCLRLVYQITTSSESLSDPSQLNL
YMRFEDESFDRLLWSAKEPSDSWLIASLDLQNSSKKFKILIEGVLGQGNTASIALFEI
KMTTGYCIECDFEENHLCGFVNRWNPNVNWFVGGGSIRNVHSILPQDHTFKSELGHYM
YVDSVYVKHFQEVAQLISPLTTAPMAGCLSFYYQIQQGNDNVFSLYTRDVAGLYEEIW
KADRPGNAAWNLAEVEFNAPYPMEVIFEVAFNGPKGGYVALDDISFSPVHCQNQTELL
FSAVEASCNFEQDLCNFYQDKEGPGWTRVKVKPNMYRAGDHTTGLGYYLLANTKFTSQ
PGYIGRLYGPSLPGNLQYCLRFHYAIYGFLKMSDTLAVYIFEENHVVQEKIWSVLESP
RGVWMQAEITFKKPMPTKVVFMSLCKSFWDCGLVALDDITIQLGSCSSSEKLPPPPGE
CTFEQDECTFTQEKRNRSSWHRRRGETPTSYTGPKGDHTTGVGYYMYIEASHMVYGQK
ARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDSEESLLWRRRGEQSISWL
RALIEYSCERQHQIIFEAIRGVSIRSDIAIDDVKFQAGPCGEMEDTTQQSSGYSEDLN
EIEY"
BASE COUNT 956 a 728 c 746 g 936 t
ORIGIN
1 ggggagtcgt ggctggcctt tcaaagtgtg cagttgtctc ctccctgtcc agccccatcg
61 tcgcccagga ccagctgggc cgcggtctga cctgaggctg ctgctcagcg ccggggcgct
121 ggcgctctcc attcgagcac cttccagcat accgctcggc tccgggagcc gctctgcaaa
181 gttgggcagc tcagagcgca agctttgcct ctcgacttct ccctccttgg gtccccggcg
241 cccccgcctc ccacgatccc tttcactagg agcagccagt cccagcgggc tggcaacttg
301 caccccttcc tagtcatcct ccctgaaacg cgaccatgct gttaaggggc gtcctcctgg
361 cgttgcaagc cctgcagctc gccggtgccc tcgacctgcc cgctgggtcc tgtgcctttg
421 aagagagcac ttgcggcttt gactccgtgt tggcctctct gccgtggatt ttaaatgagg
481 aaggccatta catttatgtg gatacctcct ttggcaagca gggggagaaa gctgtgctgc
541 taagtcctga cttacaggct gaggaatgga gctgcctccg tttggtctac cagataacca
601 catcttcgga gtctctgtca gatcccagcc agctgaacct ctacatgaga tttgaagatg
661 aaagctttga tcgcttgctt tggtcagcta aggaaccttc agacagctgg ctcatagcca
721 gcttggattt gcaaaacagt tccaagaaat tcaagatttt aatagaaggt gtactaggac
781 agggaaacac agccagcatc gcactatttg aaatcaagat gacaaccggc tactgtattg
841 aatgtgactt tgaagaaaat catctctgtg gctttgtgaa ccgctggaat cccaatgtga
901 actggtttgt tggaggagga agtattcgga atgtccactc cattctccca caggatcaca
961 ccttcaagag tgaactgggc cactacatgt acgtggactc agtttatgtg aagcacttcc
1021 aggaggtggc acagctcatc tccccgttga ccacggcccc catggctggc tgcctgtcat
1081 tttattacca gatccagcag gggaatgaca atgtcttttc cctttacact cgggatgtgg
1141 ctggccttta cgaggaaatc tggaaagcag acaggccagg gaatgctgcc tggaaccttg
1201 cggaggtcga gttcaatgct ccttacccca tggaggttat ttttgaagtt gctttcaatg
1261 gtcccaaggg aggttatgtt gccctggatg atatttcatt ctctcctgtt cactgccaga
1321 atcagacaga acttctgttc agtgccgtgg aagccagctg caattttgag caagatctct
1381 gcaactttta ccaagataaa gaaggtccag gttggacccg agtgaaagta aaaccaaaca
1441 tgtatcgggc tggagaccac actacaggct tagggtatta cctgctagcc aacacaaagt
1501 tcacatctca gcctggctac attggaaggc tctatgggcc ctccctacca ggaaacttgc
1561 agtattgtct gcgttttcat tatgccatct atggattttt aaaaatgagt gacaccctag
1621 cagtttacat ctttgaagag aaccatgtgg ttcaagagaa gatctggtct gtgttggagt
1681 ccccaagggg tgtttggatg caagctgaaa tcacctttaa gaagcccatg cctaccaagg
1741 tggttttcat gagcctatgc aaaagtttct gggactgtgg gcttgtagcc ctggatgaca
1801 ttacaataca attgggaagc tgctcatctt cagagaaact tccacctcca cctggagagt
1861 gtactttcga gcaagatgaa tgtacattta ctcaggagaa aagaaaccgg agcagctggc
1921 acaggaggag gggagaaact cccacttcct acacaggacc aaagggagat cacactactg
1981 gggtaggcta ctacatgtac attgaggcct cccatatggt gtatggacaa aaagcacgcc
2041 tcttgtccag gcctctgcga ggagtctctg gaaaacactg cttgaccttt ttctaccaca
2101 tgtatggagg gggcactggc ctgctgagtg tttatctgaa aaaggaagaa gacagtgaag
2161 agtccctctt atggaggaga agaggtgaac agagcatttc ctggctacga gcactgattg
2221 aatacagctg tgagaggcaa caccagataa tttttgaagc cattcgagga gtatcaataa
2281 gaagtgatat tgccattgat gatgttaaat ttcaggcagg accctgtgga gaaatggaag
2341 atacaactca acaatcatca ggatattctg aggacttaaa tgaaattgag tattaagaaa
2401 tgatctgcat tggatttact agacgaaaac catacctctc ttcaatcaaa atgaaaacaa
2461 agcaaatgaa tactggacag tcttaacaat tttataagtt ataaaatgac tttagagcac
2521 cctccttcat tacttttgca aaaacatact gactcagggc tctttttttc tttttgcata
2581 tgacaactgt tactagaaat acaggctact ggttttgcat agatcattca tcttaatttc
2641 ggtaccagtt aaaaatacaa atgtactata ttgtagtcat tttaaagtac acaaagggca
2701 caatcaaaat gagatgcact catttaaatc tgcattcagt gaatgtattg ggagaaaaat
2761 aggtcttgca ggtttccttt tgaattttaa gtatcataaa tattttttaa gtaaataata
2821 cggggtgtca gtaatatctg cagaatgaat gcagtctttc atgctaatga gttagtctgg
2881 aaaaataaag tcttattttc tatgttttat tcatagaaat ggagtattaa tttttaatat
2941 tttcaccata tgtgataaca aaggatcttt catgaatgtc caagggtaag tcagtattaa
3001 ttaatgctgt attacaaggc aatgctacct tctttattcc ccctttgaac tacctttgaa
3061 gtcactatga gcacatggat agaaatttaa cttttttttg taaagcaagc ttaaaatgtt
3121 tatgtataca tacccagcaa cttttataaa tgtgttaaac aattttactg atttttataa
3181 taaatatttt ggtaagattt tgaataatat gaattcaggc agatatacta aactgctttt
3241 atttacttgt ttagaaaatt gtatatatat gtttgtgtat cctaacagct gctatgaaat
3301 tataaaatta cctaataaaa ataatttgaa aatcctaaaa aaaaaaaaaa aaaaaaaaaa
3361 aaaaaa
//