LOCUS BC016341 2728 bp mRNA linear HUM 06-JUL-2005
DEFINITION Homo sapiens interferon stimulated exonuclease gene 20kDa, mRNA
(cDNA clone IMAGE:3930220), complete cds.
ACCESSION BC016341
VERSION BC016341.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2728
/db_xref="H-InvDB:HIT000037543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3930220"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2728
/gene="ISG20"
/gene_synonym="HEM45"
/db_xref="GeneID:3669"
/db_xref="MIM:604533"
CDS 162..425
/gene="ISG20"
/gene_synonym="HEM45"
/codon_start=1
/product="ISG20 protein"
/protein_id="AAH16341.1"
/db_xref="GeneID:3669"
/db_xref="MIM:604533"
/translation="MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIR
PEGEITDYRTRVSGVTPQHMVGATPFAVARLEVPFPSSPTAAV"
BASE COUNT 611 a 701 c 772 g 644 t
ORIGIN
1 ggggagacgt gagctgaggg cgcagaggca ggcaggtgag agcgggagct ggagcagcag
61 ctggggaggc agcgggaggg gccttcccgg tccccaggct gcggggcagg ccagaggccc
121 tgggacacac gggcaggcat ctctgagggt ccccaaggaa catggctggg agccgtgagg
181 tggtggccat ggactgcgag atggtggggc tggggcccca ccgggagagt ggcctggctc
241 gttgcagcct cgtgaacgtc cacggtgctg tgctgtacga caagttcatc cggcctgagg
301 gagagatcac cgattacaga acccgggtca gcggggtcac ccctcagcac atggtggggg
361 ccacaccatt tgccgtggcc aggctagagg tccccttccc atcctctcca acggcagctg
421 tgtgaaagca agctgactgg cctgtgtgac cagagcaggg caggctgtcc atgtgggagg
481 cggggcgagg aacgcggggc tggggcactc acagctgggc gcctgggctg ctggaggcct
541 ggagtggtcg ttcactcttc tggctcagtg tggcagtggc aggcgggctc tggattcatc
601 ccactggctt caaggcctgg ctttgccact aactagccgt gtgactgtcc cagttatcaa
661 atggtgcttg gcaaatcaca ccaaaactta ccggttcaaa caatgtcaat acttatttcg
721 ctcggccacc tgcagtttgg gcaggtgctc tgcagcagga caggccgtca gttaaggcac
781 cttgaaggct gggggctgga accattggaa ggtttgctca cccacctgtc tggtggctgg
841 tgctggcctg ccttggacac atcactatct cggtggcttt tccccgtggt ctttccagca
901 tggtggcttt ggggtggcca gacatttatt tatttattta tttattgaga cggagtcgtg
961 ctcagtcgcc caagctgtag tgcagtggca cgatctcagc tcacttgcaa tctccctccc
1021 aggctcaagc aattctcctg cctcagcctc ccgagtaact gggaatagcc acggcgcatg
1081 ggtaattttt gcatttttag tagagacaga gtctcaccat gttggccagg ctggtctcaa
1141 actcctggcc tcaggtgatc cacctgcctc acctcccaaa gtgctgggat tacagacgtg
1201 agacaccgtg cctggctggt ggccggactt cttatagaat tgcggtccca gagagaagtc
1261 agaagtcata cagcccagcc catatgcaat gggaggggag tttgattcca tcttttttaa
1321 gaagagtgtc aaggaatttg caaacttgtt ttaaaatcat cagagtaagc ctgggcatgt
1381 cactcctctg catttcagat atttcctttg taaaactcag ttaaatgcag tgctccctcc
1441 tcactgttag ttttctgtgg ctgccgtaag gaagccatca acttagtgat tcacagcaac
1501 acagatgtct tctcttacag ttctgtagtt tcgaagttca gcgtgggtct cactggtcta
1561 aaatcaaagt gtcagtgggg ctaggttcct tctggatgct ctggggaaga atccatttcc
1621 tcgccctttc tggcttctag aggctgcctg aataccttaa ctcacggccc ctccctccat
1681 cttcaaagcc agcaacagcc tgtttgcctc atgtggattc actctgacct ccacatgtaa
1741 ggaggcttgt gattatgttg ggaccacatg ggtaggccag gtgatctccc catttgaagg
1801 tcgactgatt agcaatctaa gttctgcccg gaactttaat tcctctttgc caggtaatgc
1861 attcacagat cctggggact agggtgtgga catctttggg aggtcattat tctgcctgcc
1921 ataatagaat tgttgggaag attaaacaac ataatataca tgacgtatgt tgaggcacgc
1981 ttggcacctg ggaaatactc aggatgtact aaccattgct cctacacagt tcagctcctg
2041 aaggagtcca ggtgggcttt tggcacagaa tgaaactatc aggtgtgagg agggtcctag
2101 tccaatctct tcttttcaaa gatgatacat ttgaagccca gggaggactg ataatttgcc
2161 caaggtcata cagccagtca aggagggatt gctcccttgc cagccccagc cccacccaga
2221 agatgctggg tcatgtaggg gtgggcacat gtcttcctgg ccagatcctg cagctcctga
2281 aaggcaagct ggtggtgggt catgacctga agcacgactt ccaggcactg aaagaggaca
2341 tgagcggcta cacaatctac gacacgtcca ctgacaggct gttgtggcgt gaggccaagc
2401 tggaccactg caggcgtgtc tccctgcggg tgctgagtga gcgcctcctg cacaagagca
2461 tccagaacag cctgcttgga cacagctcgg tggaagatgc gagggcaacg atggagctct
2521 atcaaatctc ccagagaatc cgagcccgcc gagggctgcc ccgcctggct gtgtcagact
2581 gaagccccat ccagcccgtt ccgcagggac tagaggcttt cggctttttg ggacagcaac
2641 taccttgctt ttggaaaata catttttaat agtaaagtgg ctctatattt tctctacgca
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//