LOCUS BC016327 1734 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens nucleoporin 62kDa C-terminal like, mRNA (cDNA clone
MGC:23732 IMAGE:4102213), complete cds.
ACCESSION BC016327
VERSION BC016327.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000037535"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23732 IMAGE:4102213"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1734
/gene="NUP62CL"
/gene_synonym="FLJ20130"
/gene_synonym="RP13-383K5.2"
/db_xref="GeneID:54830"
/db_xref="HGNC:HGNC:25960"
CDS 257..811
/gene="NUP62CL"
/gene_synonym="FLJ20130"
/gene_synonym="RP13-383K5.2"
/codon_start=1
/product="nucleoporin 62kDa C-terminal like"
/protein_id="AAH16327.1"
/db_xref="GeneID:54830"
/db_xref="HGNC:HGNC:25960"
/translation="MQFTSISNSLTSTAAIGLSFTTSTTTTATFTTNTTTTITSGFTV
NQNQLLSRGFENLVPYTSTVSVVATPVMTYGHLEGLINEWNLELEDQEKYFLLQATQV
NAWDHTLIENGEMIRILHGEVNKVKLDQKRLEQELDFILSQQQELEFLLTYLEESTRD
QSGLHYLQDADEEHVEISTRSAEF"
BASE COUNT 495 a 324 c 369 g 546 t
ORIGIN
1 ggggagtctc ggttagcttc acttcagcgg gaacctgccc actaaggagg ccgattcttt
61 ccggctcgag caggtccgga cccgcccctc tggcgtctag cagtctcgga ggcctgcccg
121 tatagttcag ggccggacag cgagcggcgg cgacttgcca gtaagggttt ggagtcatca
181 gcaggtttaa ttttggagga actttacagg tttggctcca gcagctgctg ttgccaccac
241 cactagttca agcaccatgc agtttacctc aatatcaaat tctttgacct ccactgctgc
301 tattgggctc tcatttacaa cttcaacgac taccaccgcc actttcacca ccaacactac
361 taccacaatc accagtggct ttactgtgaa ccaaaaccaa ctgttatcaa gagggtttga
421 aaaccttgta ccttatactt caactgttag tgtagtagca actcctgtga tgacatatgg
481 tcatctggag ggtcttataa atgagtggaa ccttgagctg gaagatcaag agaagtactt
541 tcttctccag gccactcagg tcaatgcttg ggaccataca ttgattgaga atggtgagat
601 gattcgtatt ttacatggag aagtgaacaa agtgaaactg gatcagaaaa gattggaaca
661 agaattggat tttatcctgt cacagcagca ggaactagaa tttctgttga cttatttaga
721 ggagtctacg cgtgaccaga gtggacttca ttatctgcag gatgcagatg aggagcatgt
781 ggagatctcc accagatctg cagaattctg aatgcccata tggactccct gcagtggatt
841 gatcggaatt caggcatgct gcgaaggaag gtagaagtgg taacacgggt tttcgaggat
901 tatcgtcacg aggagcatgc acacaatgtc aacactgctt tttagtgaat gaccatatct
961 tcagcatgtc gtttctggat tattacctac aaattctgat gttaaataga gtagtattta
1021 tacttaatat ttcatcttga tcataatgaa ttgtgcatcc tttttttcat ttaagtattg
1081 tactgttgag aattatacct tagttttgtt tttagtatta gaaaatcaaa attatactag
1141 cccctttgtc cagacagcaa cctcttagat gctgactcta tatgtgtaat ttatgtctta
1201 ctctccctgg catcagtaca catcatcctt ctcactccag ttgaatcata gggtgatgtc
1261 tgccaaaagt acatgccaac ctatatagtg ctagatactg taaagtctct tctcctcaaa
1321 ggaacctact gtctagtttg agatataatt aatgcttgtc tgcataaaaa caatatagat
1381 aatataaaga agtgcagtat gaattataga aagtgtgtta tagagattca gagcagggag
1441 gaaaagttag ggtagattat tattaaaggg ttaaggaaag gtaagtttca aggaatttgg
1501 ttatttttaa tgtatggata tactggcatt ttatttggtt ttagcatatg atttatagtt
1561 ggtgatttcc gtatatttgt ttgtttttct ttttttttgt ttgtttgttt tgttttgttt
1621 taaataagcc ttgttcttag gtttggaaca gtctggtctc ctgtgtttca tgtttcacct
1681 aagtcataaa taaaggtaat gtcctaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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