LOCUS BC016314 1640 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens X-ray repair complementing defective repair in Chinese
hamster cells 4, mRNA (cDNA clone MGC:22739 IMAGE:4108822),
complete cds.
ACCESSION BC016314
VERSION BC016314.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1640)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1640)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12408648.
FEATURES Location/Qualifiers
source 1..1640
/db_xref="H-InvDB:HIT000037526"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22739 IMAGE:4108822"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1640
/gene="XRCC4"
/db_xref="GeneID:7518"
/db_xref="HGNC:HGNC:12831"
/db_xref="MIM:194363"
CDS 85..1095
/gene="XRCC4"
/codon_start=1
/product="X-ray repair complementing defective repair in
Chinese hamster cells 4"
/protein_id="AAH16314.1"
/db_xref="GeneID:7518"
/db_xref="HGNC:HGNC:12831"
/db_xref="MIM:194363"
/translation="MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWT
GTVSESEISQEADDMAMEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLK
DVSFRLGSFNLEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQG
RFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAIC
SEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRM
QRNLGTEPKMAPQENQLQEKENSRPDSSLPETSKKEHISAENMSLETLRNSSPEDLFD
EI"
BASE COUNT 598 a 256 c 324 g 462 t
ORIGIN
1 ggggaccgga agtagagtca cggagaggta ggatccggaa gtggggctgc ctctttaaat
61 aacaaaaatc tgaggtatta agaaatggag agaaaaataa gcagaatcca ccttgtttct
121 gaacccagta taactcattt tctacaagta tcttgggaga aaacactgga atctggtttt
181 gttattacac ttactgatgg tcattcagca tggactggga cagtttctga atcagagatt
241 tcccaagaag ctgatgacat ggcaatggaa aaagggaaat atgttggtga actgagaaaa
301 gcattgttgt caggagcagg accagctgat gtatacacgt ttaatttttc taaagagtct
361 tgttatttct tctttgagaa aaacctgaaa gatgtctcat tcagacttgg ttccttcaac
421 ctagagaaag ttgaaaaccc agctgaagtc attagagaac ttatttgtta ttgcttggac
481 accattgcag aaaatcaagc caaaaatgag cacctgcaga aagaaaatga aaggcttctg
541 agagattgga atgatgttca aggacgattt gaaaaatgtg tgagtgctaa ggaagctttg
601 gagactgatc tttataagcg gtttattctg gtgttgaatg agaagaaaac aaaaatcaga
661 agtttgcata ataaattatt aaatgcagct caagaacgag aaaaggacat caaacaagaa
721 ggggaaactg caatctgttc tgaaatgact gctgaccgag atccagtcta tgatgagagt
781 actgatgagg aaagtgaaaa ccaaactgat ctctctgggt tggcttcagc tgctgtaagt
841 aaagatgatt ccattatttc aagtcttgat gtcactgata ttgcaccaag tagaaaaagg
901 agacagcgaa tgcaaagaaa tcttgggaca gaacctaaaa tggctcctca ggagaatcag
961 cttcaagaaa aggaaaattc taggcctgat tcttcactac ctgagacgtc taaaaaggag
1021 cacatctcag ctgaaaacat gtctttagaa actctgagaa acagcagccc agaagacctc
1081 tttgatgaga tttaacagtc tcaaaaaata ctttgatgtt cactagacta tgttttctat
1141 tcatttcttt aaaatgaaaa aggagaattt caagtcagca gccgctatta ccgtatctta
1201 caatttaatt acatacacag tgaattgaaa ccattgtgca aaatggatta cacatgtata
1261 caaagatacg atttgatgat gacactggca cattattcta aactattcat tcagcatgcc
1321 tataattaca taaattgtat gagacttttt gttgcaaagg acacatttat catattcatt
1381 cacacatatt atatgtgata gctgtccaac atcctgtctg ggaagatttt gaaaacagga
1441 caaagaaaac atcactttaa aatgtcttca gctttttttg aatagacgta ttcaaacata
1501 ttctgaacat tgatgtttga acattttaat ttgtgtgatg atgtagaaaa tataatttta
1561 gtttgtacat aaacattgtg aaaatctgat aataaaattt ttgatacact aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa
//