LOCUS BC016182 1099 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CD48 molecule, mRNA (cDNA clone MGC:22996 IMAGE:4850933), complete cds. ACCESSION BC016182 VERSION BC016182.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1099) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1099) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: b Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361570. FEATURES Location/Qualifiers source 1..1099 /db_xref="H-InvDB:HIT000037500" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22996 IMAGE:4850933" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1099 /gene="CD48" /gene_synonym="BLAST" /gene_synonym="BLAST1" /gene_synonym="hCD48" /gene_synonym="mCD48" /gene_synonym="MEM-102" /gene_synonym="SLAMF2" /db_xref="GeneID:962" /db_xref="HGNC:HGNC:1683" /db_xref="MIM:109530" CDS 33..764 /gene="CD48" /gene_synonym="BLAST" /gene_synonym="BLAST1" /gene_synonym="hCD48" /gene_synonym="mCD48" /gene_synonym="MEM-102" /gene_synonym="SLAMF2" /codon_start=1 /product="CD48 molecule" /protein_id="AAH16182.1" /db_xref="GeneID:962" /db_xref="HGNC:HGNC:1683" /db_xref="MIM:109530" /translation="MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLN ISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKE DNSTYIMRVLKKTGNEQEWKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGES VNYTWYGDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLA RSFGVEWIASWLVVTVPTILGLLLT" BASE COUNT 333 a 230 c 238 g 298 t ORIGIN 1 tcctgcgttg ctgggaagtt ctggaaggaa gcatgtgctc cagaggttgg gattcgtgtc 61 tggctctgga attgctactg ctgcctctgt cactcctggt gaccagcatt caaggtcact 121 tggtacatat gaccgtggtc tccggcagca acgtgactct gaacatctct gagagcctgc 181 ctgagaacta caaacaacta acctggtttt atactttcga ccagaagatt gtagaatggg 241 attccagaaa atctaagtac tttgaatcca aatttaaagg cagggtcaga cttgatcctc 301 agagtggcgc actgtacatc tctaaggtcc agaaagagga caacagcacc tacatcatga 361 gggtgttgaa aaagactggg aatgagcaag aatggaagat caagctgcaa gtgcttgacc 421 ctgtacccaa gcctgtcatc aaaattgaga agatagaaga catggatgac aactgttatt 481 tgaaactgtc atgtgtgata cctggcgagt ctgtaaacta cacctggtat ggggacaaaa 541 ggcccttccc aaaggagctc cagaacagtg tgcttgaaac cacccttatg ccacataatt 601 actccaggtg ttatacttgc caagtcagca attctgtgag cagcaagaat ggcacggtct 661 gcctcagtcc accctgtacc ctggcccggt cctttggagt agaatggatt gcaagttggc 721 tagtggtcac ggtgcccacc attcttggcc tgttacttac ctgagatgag ctcttttaac 781 tcaagcgaaa cttcaaggcc agaagatctt gcctgttggt gatcatgctc ctcaccagga 841 cagagactgt ataggctgac cagaagcatg ctgctgaatt atcaacgagg attttcaagt 901 taacttttaa atactggtta ttatttaatt ttatatccct ttgttgtttt ctagtacaca 961 gagatataga gatacacatg cttttttccc acccaaaatt gtgacaacat tatgtgaatg 1021 ttttattatt ttttaaaata aacatttgat ataattatca attaactgaa aaaaaaaaaa 1081 aaaaaaaaaa aaaaaaaaa //