LOCUS       BC016054                2991 bp    mRNA    linear   HUM 16-SEP-2003
DEFINITION  Homo sapiens neuron navigator 2, mRNA (cDNA clone IMAGE:4862141),
            complete cds.
ACCESSION   BC016054
VERSION     BC016054.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
            Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
            Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
            Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
            Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
            Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
            Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
            George Yang, Scott Zuyderduyn, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 34 Row: h Column: 20
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 19923813
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2991
                     /db_xref="H-InvDB:HIT000037467"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4862141"
                     /tissue_type="Skin, melanotic melanoma, high MDR."
                     /clone_lib="NIH_MGC_49"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2991
                     /gene="NAV2"
                     /gene_synonym="FLJ10633"
                     /gene_synonym="FLJ11030"
                     /gene_synonym="FLJ23707"
                     /gene_synonym="HELAD1"
                     /gene_synonym="KIAA1419"
                     /gene_synonym="POMFIL2"
                     /gene_synonym="RAINB1"
                     /db_xref="GeneID:89797"
                     /db_xref="MIM:607026"
     CDS             23..2644
                     /gene="NAV2"
                     /gene_synonym="FLJ10633"
                     /gene_synonym="FLJ11030"
                     /gene_synonym="FLJ23707"
                     /gene_synonym="HELAD1"
                     /gene_synonym="KIAA1419"
                     /gene_synonym="POMFIL2"
                     /gene_synonym="RAINB1"
                     /codon_start=1
                     /product="NAV2 protein"
                     /protein_id="AAH16054.1"
                     /db_xref="GeneID:89797"
                     /db_xref="MIM:607026"
                     /translation="MSLSNPTMLRTHSLSNADGQYDPYTDSRFRNSSMSLDEKSRTMS
                     RSGSFRDGFEEVHGSSLSLVSSTSSVYSTPEEKCQSEIRKLRRELDASQEKVSALTTQ
                     LTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQNAAAQAAIN
                     GVINTPELNCKGNGTAQSADLRIRRQHSSDSVSSINSATSHSSVGSNIESDSKKKKRK
                     NWLRSSFKQAFGKKSPKSASSHSDIEEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNS
                     LISECMDSEAETVMQLRNELRDKEMKLTDIRLEALSSAHQLDQLREAMNRMQSEIEKL
                     KAENDRLKSESQGSGCSRAPSQVSISASPRQSMGLSQHSLNLTESTSLDMLLDDTGEC
                     SARKEGGRHVKIVVSFQEEMKWKEDSRPHLFLIGCIGVSGKTKWDVLDGVVRRLFKEY
                     IIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSETPELLPCGYLVGENTTISVTVKGLAE
                     NSLDSLVFESLIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRE
                     LTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNAVDMPLVIILDNLHHVSSLGEIF
                     NGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRWVLCANHTEPVKGFLGRFLRRKL
                     METEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDVTIGPRLFLSCPIDVDGSR
                     VWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDTYPWAASPQQHEWPPLL
                     QLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEAANYSSPQSYDSDSN
                     SNSHHDDILDSSLESTL"
     misc_feature    257..1060
                     /gene="NAV2"
                     /gene_synonym="FLJ10633"
                     /gene_synonym="FLJ11030"
                     /gene_synonym="FLJ23707"
                     /gene_synonym="HELAD1"
                     /gene_synonym="KIAA1419"
                     /gene_synonym="POMFIL2"
                     /gene_synonym="RAINB1"
                     /note="Smc; Region: Chromosome segregation ATPases [Cell
                     division and chromosome partitioning]"
                     /db_xref="CDD:COG1196"
     misc_feature    1625..1978
                     /gene="NAV2"
                     /gene_synonym="FLJ10633"
                     /gene_synonym="FLJ11030"
                     /gene_synonym="FLJ23707"
                     /gene_synonym="HELAD1"
                     /gene_synonym="KIAA1419"
                     /gene_synonym="POMFIL2"
                     /gene_synonym="RAINB1"
                     /note="AAA; Region: ATPases associated with a variety of
                     cellular activities"
                     /db_xref="CDD:smart00382"
BASE COUNT          764 a          848 c          757 g          622 t
ORIGIN      
        1 gagtcccacc actgtcaccc agatgagctt gtccaacccg accatgctga ggactcacag
       61 cctctccaat gctgatgggc agtatgatcc atacactgac agccgcttcc ggaatagctc
      121 catgtccctg gatgagaaga gcagaaccat gagccgttca ggctcattcc gggatgggtt
      181 tgaagaagtt catggatcct cactctcctt ggtttccagc acatcgtcag tttattctac
      241 accagaagaa aaatgccagt cagagattcg caagctgcgg cgggaactgg atgcctccca
      301 ggagaaagtt tcagctttga ccacccagct gacagcaaac gctcaccttg tggcagcctt
      361 tgaacagagt cttggtaaca tgacaatcag gctccagagt ctgaccatga cagctgagca
      421 gaaggactca gaactgaatg agttaagaaa aaccattgag ctgctaaaga aacagaacgc
      481 agctgcccag gctgccatta atggagtaat taacacacct gagctcaact gcaaaggaaa
      541 cggcactgcc cagtctgcag acctccgcat ccgcaggcag cactcctcag acagcgtctc
      601 cagcatcaac agtgccacca gccactccag cgtgggcagc aacatagaga gtgactcaaa
      661 gaagaagaag cggaagaact ggttacgcag ctccttcaag caagctttcg ggaagaagtc
      721 cccaaaatct gcgtcctctc attcagatat tgaggagatg acggattctt ctttgccttc
      781 ctcaccaaag ttaccgcaca atgggtccac aggttccacc ccactgctga ggaattctca
      841 ctccaactct ctaatttcag aatgcatgga tagtgaagct gagaccgtca tgcagctccg
      901 aaatgagtta agagacaagg agatgaagct gacggatatc cgcttagaag ctctcagttc
      961 tgcccaccag ctggaccagc tccgggaggc catgaacagg atgcagagtg aaatagagaa
     1021 gctgaaagct gagaatgatc ggctgaagtc agagtctcaa ggcagtggct gcagccgggc
     1081 tccttcccaa gtgtccatct ctgcctcccc gaggcagtcc atgggcctct cccagcacag
     1141 cttgaacctc actgagtcaa ccagcctgga catgttgctg gatgacactg gtgaatgctc
     1201 ggctcggaag gaaggaggca ggcatgttaa gatagttgtc agctttcagg aggaaatgaa
     1261 gtggaaggag gattccagac cacatctctt tcttattggc tgcattggag ttagtggcaa
     1321 gacgaagtgg gatgtgctcg atggggtggt tagacggctg ttcaaagaat acatcattca
     1381 tgtcgaccca gtgagtcagc tagggctgaa ttcagacagc gttcttggct acagcattgg
     1441 agaaatcaag cgcagcaaca cttccgaaac accggagctg cttccttgtg gctatctggt
     1501 tggagagaac acgaccatct cagtgactgt gaaagggctc gcagaaaaca gcctggactc
     1561 actggtgttt gagtccttga ttcccaagcc catcctgcag cgctacgtct ccctcctgat
     1621 agagcaccgt cggatcattc tctctggccc cagcggcact gggaaaacct acctggccaa
     1681 ccggctgtct gagtatatag tgcttcgaga gggacgggag ttgacagacg gggttatcgc
     1741 cacctttaac gtggaccata agtccagcaa ggaattgcgc cagtacctgt ccaaccttgc
     1801 tgaccagtgc aacagtgaga acaatgctgt ggacatgccc ctcgtcatca tcctggacaa
     1861 cctacaccac gtgagctctc tgggcgagat cttcaatggg ctgctcaact gcaagtacca
     1921 caaatgccct tacataattg gcacaatgaa ccaggctacc tcttcgactc ccaacctgca
     1981 gcttcaccat aacttcagat gggtgctttg tgccaaccac acggagcctg tgaagggttt
     2041 ccttggccga ttcctgagga ggaagctcat ggaaacagag atcagtgggc gggtgcgcaa
     2101 tatggagctg gtaaaaatca ttgactggat tcccaaggtc tggcatcacc tcaaccgctt
     2161 cctggaggct cacagttcct cggacgtcac catcggcccc cggctcttcc tgtcatgccc
     2221 catcgatgtg gacggctcga gagtgtggtt caccgacttg tggaactatt ccattatccc
     2281 ctatctcctg gaagccgtca gagaaggact ccagctctat ggaaggcgcg ccccctggga
     2341 ggatcctgcc aagtgggtga tggacacata tccatgggca gccagcccac aacagcacga
     2401 gtggcctccc ctgctgcagt tacggcctga ggatgtcggc ttcgacggct actccatgcc
     2461 tcgggaggga tcgacaagca agcagatgcc ccccagtgat gctgaaggtg acccgctgat
     2521 gaacatgctg atgaggctgc aggaggcagc caactactcc agcccccaga gctatgacag
     2581 cgactccaac agcaacagcc atcacgatga catcttggac tcctctttgg agtccactct
     2641 gtgacagggg cccggagccc agcgccctcc tcttctcctc accgcattcc acctgcatcc
     2701 cccacatcac cctgaagatg acttcctgag ccagccccca gccacagcct tagagctgcg
     2761 ggaacaccga gaccccccgt ccttcagcct cgacctgggt gcaggcatcc cgggccagct
     2821 gcctgcggac cgcttccttc cacagcgaga actgcactac cttctgttgt actttaatta
     2881 ttgttttgcc ttgttgctgt gacctcccta agacactgaa gatacttctc gggaaaggat
     2941 catcgccgtt gaaatgaaaa gagagacaga gagaaaaaaa aaaaaaaaaa a
//