LOCUS BC016028 1419 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens chromosome 14 open reading frame 80, mRNA (cDNA clone
MGC:16771 IMAGE:3907551), complete cds.
ACCESSION BC016028
VERSION BC016028.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1419)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1419)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: b Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734692
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1419
/db_xref="H-InvDB:HIT000037454"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16771 IMAGE:3907551"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1419
/gene="C14orf80"
/db_xref="GeneID:283643"
/db_xref="HGNC:HGNC:20127"
CDS 330..1076
/gene="C14orf80"
/codon_start=1
/product="C14orf80 protein"
/protein_id="AAH16028.1"
/db_xref="GeneID:283643"
/db_xref="HGNC:HGNC:20127"
/translation="MLAQARVPLGDEMTVCQIHLYTRGCHSDQSLSHLSVTEAEMLRD
PEGGQQLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPW
VPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAV
EKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAV
LRRLQGQCRQELARLVGARPGLIWIPPPGR"
BASE COUNT 268 a 409 c 524 g 218 t
ORIGIN
1 gctggctgca tggggaggcg gcggcagcgg gtggaccccg cggctggggc ccgggccggg
61 gccctgcctg aggccatcgc cgcgttgagt cggtcgctgc cctcgggacc cagccccgag
121 atcttccgcc gcgccaagtt cgaccgtccg gaggcgacct ccgcgctctg gcagctcctc
181 ttccgtgtgc tctcgccact ccctgcgggc aacgccttgg ctacccgagg ctggcactgg
241 cacaactacc tgaggatggc tcgcagggca gtcgggagct gctgctggct ctgtcctggc
301 tcttggcccg aggacctgtg cccgagcaga tgctggccca ggcccgagtg cctctgggtg
361 acgagatgac tgtgtgccag atccacctgt acacacgcgg ctgccacagc gaccagagcc
421 ttagccatct gtctgtcact gaagcagaga tgctcaggga cccagaggga ggccagcagc
481 tgctgcggac tctggagcgt gagaaccagc gcctggaggc tgtcctggcg tggcggcgct
541 ctgagctggt cttctggcgg tggatggaca cggtcctggg cacctgtgcc ccggaggtgc
601 ctgctgcagc ctcacagccc accttcctgc cctgggtccc cgagcgcggg ggtggcgagt
661 tggacctggt agtgcgggag ctgcaggcac tggaggagga gctgcgggag gctgcggagc
721 gcaggcgggc ggcctgggag gccaaggctg gaggctgtgg acgggggcca gagtggagtg
781 ccgcgcggcg ggcctctcgg gaggctgtgg aaaaggagct gggagctcta cagcagtgct
841 gggagcgaga cggtggcccg gcccagcccc atgggccaca ccggctggtg agacgagagg
901 atggggcagc aggggaccgg gacctgcggg cagctgtggt gatcaggacg ctgaggagcc
961 aggaggcctg cctggaggcg gtgctacgtc gactacaggg acagtgtcgg caggaactgg
1021 ccaggctggt gggagcccgc cctggtctca tctggatccc gccacctgga cgctgagggc
1081 ctgtcgacgg gccctcgtgt gggaagcctg ccctggccca gcctggctgg gtcttggagg
1141 agcagattcc aaggccaggt ggccacaggg acgatgcaga tgcagagccc acgtcacatg
1201 ctcgctccag gggtggggct gggctgactc tggccggatc ccaggcctgt ggctagcagc
1261 actggggaca ggaatgactg gtcccttgag gaggtcgtga caggctcagc ctggtggtct
1321 ggaggggact cggaaataaa ttgtagcagc tttcctgcaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//