LOCUS       BC016026                 605 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens LSM6 homolog, U6 small nuclear RNA associated (S.
            cerevisiae), mRNA (cDNA clone MGC:10205 IMAGE:3910698), complete
            cds.
ACCESSION   BC016026
VERSION     BC016026.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 605)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 15 Row: h Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5901997.
FEATURES             Location/Qualifiers
     source          1..605
                     /db_xref="H-InvDB:HIT000037452"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:10205 IMAGE:3910698"
                     /tissue_type="Uterus, leiomyosarcoma"
                     /clone_lib="NIH_MGC_71"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..605
                     /gene="LSM6"
                     /gene_synonym="YDR378C"
                     /db_xref="GeneID:11157"
                     /db_xref="HGNC:HGNC:17017"
                     /db_xref="MIM:607286"
     CDS             94..336
                     /gene="LSM6"
                     /gene_synonym="YDR378C"
                     /codon_start=1
                     /product="LSM6 homolog, U6 small nuclear RNA associated
                     (S. cerevisiae)"
                     /protein_id="AAH16026.1"
                     /db_xref="GeneID:11157"
                     /db_xref="HGNC:HGNC:17017"
                     /db_xref="MIM:607286"
                     /translation="MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIA
                     LEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM"
BASE COUNT          181 a           94 c          142 g          188 t
ORIGIN      
        1 cgctttcggt tttggctggg atcatccgcg gcggccgggc tcgtggggcg cctggagtga
       61 gggttctggt tcccgccggc gaggattgtt aaaatgagtc ttcggaagca aacccctagt
      121 gacttcttaa agcaaatcat cggacgacca gttgtggtaa aattaaattc tggagtggat
      181 tatcgagggg tcctggcttg cctggatggc tacatgaata tagccctgga gcagacagaa
      241 gaatatgtaa atggacaact gaagaataag tatggggatg catttatccg aggaaacaat
      301 gtgttgtaca tcagtacaca gaagagacgg atgtgaagac accaagagag caacgctttt
      361 catagttgga tatatttttt tatgaatttt ttctaatttt tgcttctttt gtgatacaat
      421 ttgtcctctt tttataatag ttggtgattt ttcactgaca tgtgagtaag ataaatgtat
      481 acaattgtgg atttaattgt gaaatgttct ttcacttgta agtttcagtc attttctttt
      541 acctcgttgt cagtgtacag aatgctaaaa taattaaaaa aagacaaaat aaaaaaaaaa
      601 aaaaa
//