LOCUS BC016026 605 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:10205 IMAGE:3910698), complete cds. ACCESSION BC016026 VERSION BC016026.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 605) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 605) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: h Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5901997. FEATURES Location/Qualifiers source 1..605 /db_xref="H-InvDB:HIT000037452" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10205 IMAGE:3910698" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..605 /gene="LSM6" /gene_synonym="YDR378C" /db_xref="GeneID:11157" /db_xref="HGNC:HGNC:17017" /db_xref="MIM:607286" CDS 94..336 /gene="LSM6" /gene_synonym="YDR378C" /codon_start=1 /product="LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)" /protein_id="AAH16026.1" /db_xref="GeneID:11157" /db_xref="HGNC:HGNC:17017" /db_xref="MIM:607286" /translation="MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIA LEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM" BASE COUNT 181 a 94 c 142 g 188 t ORIGIN 1 cgctttcggt tttggctggg atcatccgcg gcggccgggc tcgtggggcg cctggagtga 61 gggttctggt tcccgccggc gaggattgtt aaaatgagtc ttcggaagca aacccctagt 121 gacttcttaa agcaaatcat cggacgacca gttgtggtaa aattaaattc tggagtggat 181 tatcgagggg tcctggcttg cctggatggc tacatgaata tagccctgga gcagacagaa 241 gaatatgtaa atggacaact gaagaataag tatggggatg catttatccg aggaaacaat 301 gtgttgtaca tcagtacaca gaagagacgg atgtgaagac accaagagag caacgctttt 361 catagttgga tatatttttt tatgaatttt ttctaatttt tgcttctttt gtgatacaat 421 ttgtcctctt tttataatag ttggtgattt ttcactgaca tgtgagtaag ataaatgtat 481 acaattgtgg atttaattgt gaaatgttct ttcacttgta agtttcagtc attttctttt 541 acctcgttgt cagtgtacag aatgctaaaa taattaaaaa aagacaaaat aaaaaaaaaa 601 aaaaa //