LOCUS BC015929 2553 bp mRNA linear HUM 02-JAN-2004 DEFINITION Homo sapiens nuclear receptor subfamily 1, group D, member 2, mRNA (cDNA clone IMAGE:3912370), partial cds. ACCESSION BC015929 VERSION BC015929.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2553) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2553) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: j Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8922721. FEATURES Location/Qualifiers source 1..2553 /db_xref="H-InvDB:HIT000088859" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3912370" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2553 /gene="NR1D2" /gene_synonym="BD73" /gene_synonym="EAR-1r" /gene_synonym="Hs.37288" /gene_synonym="HZF2" /gene_synonym="RVR" /db_xref="GeneID:9975" /db_xref="MIM:602304" CDS <1..79 /gene="NR1D2" /gene_synonym="BD73" /gene_synonym="EAR-1r" /gene_synonym="Hs.37288" /gene_synonym="HZF2" /gene_synonym="RVR" /codon_start=2 /product="NR1D2 protein" /protein_id="AAH15929.1" /db_xref="GeneID:9975" /db_xref="MIM:602304" /translation="PFWEIISVHTNHIIQGSCHMCGVSY" BASE COUNT 863 a 335 c 455 g 900 t ORIGIN 1 gcctttctgg gaaatcattt cagtccacac caaccatatt attcagggtt cctgccatat 61 gtgtggggta tcctactgat acacacgtat tcaaagttta tgggtacaac aaagacatag 121 tacatgtaca taatatgtat gtgaatatag ttaaatatat ttcttcacaa tattttaaac 181 tgtgaagaac tttatcatac aggaaactta aaacaagagg tgtcaaaaga cccaaattag 241 gtgcatttta cttgtttatg atggcataac cattgcttta aaatgtttag acagtagaat 301 attgaattta tgctctattt ttgtttattt aagcaacact taatgtaaaa gtgcaacagg 361 caattgaatc caaatttcaa cgacaaaaaa aaaacatgta ttttagagtt catctttggc 421 aaaatctttg gttcagggta ctagttgttt aaaagttgat tcatattctt accttgtgct 481 gagaaaggtt gcattgctgc cccttataca catgctgcag cttgatgtta aagaattttt 541 attctttctg aagaactaat taatgtttaa agcaactgtt taatatgatg gcatgtgtgt 601 gtgtgcgtgc gtgtgtatgt tctgagtcca cttctttttt cctaaataac actacaggga 661 ttttgtcata ttagatttaa tttataattt gaaaaatcat ctagtgtgtg acctacaggc 721 ttagaaatgg tatagtcaaa gacattttat ccacatttct aatagtggac ttgattaagt 781 agataagatc agcatctgtt tatggtagta ggagaaatag ccaaagttga ggattttatg 841 tatgttttcc tgtttacctg gaaaatagca attaattgga ttttttggta aagattgcct 901 tctgtataat gtttggatta tataaaattg caaaaatgat aacagcccgc tttactgtac 961 taagcctgtt actttcatga cgtgtgagca gaatgcctta ttttgtaatc ttgtttaact 1021 tgttgctact gggacttgat ttactgtggc actagttaag taagttaaaa aaaagttaaa 1081 ccctctcatt attaaagagg aaaggcgatg gtgatgtctg tagtacaata taaaccataa 1141 ttgtgattta ccttaagtag gtataactct tatgggatat acagtatagt ttttgtgaat 1201 ctttacatga tagcattatc tttttataat tttttttcct aagataaaca aatgcatagt 1261 tttcttctat gggtgataga aacagctttt tgaagtaatg aaaacctcaa aagatcatgt 1321 tgattcttaa tttttgcctt ttgcataagc ctctttataa catgtatctt taaaacaatt 1381 aagtctttag gaatgtgtaa ccagaactat gttagtattg cttataaaac tttagttagg 1441 ttcaatatat acatatatac atctctatat aggtatatag atttgcattt tgtcttgtaa 1501 aattttattt gaataaattc ttcctgtagg taatgggaaa caaaattaat agttcatatg 1561 tcactcatag catttctata tttgaaagta gcccaatata aaacttttga ttctaaaatt 1621 aaaccagcag cctattacaa gcacattctt tgattgagtc attggttata aacttactaa 1681 atgcagagaa agcagccaat ttaggaaact tctgagttgg tgggacactg ttgattaata 1741 atgtactgta tgaattaagt gatgctttaa ctttgatttt acattttaaa gttaaaatgt 1801 gggcattatg tcagcaaact taagggcatt atgtcagcaa gctaaaacat tttttttcct 1861 gtgcttttaa tgtatctctt tacatgatct gagagaggat tcaagttgat agaaatagct 1921 gaggggaaaa gggggaacat cttgggatga agcttgtcct tatggtgatg gtttaattac 1981 agattaaaaa attagaagga aatttcagtg gattaagtgt atagctttca tatctacatt 2041 tcaagaaatt accattgtaa cttgataaga gatgatttat tttatgtaaa catctttgca 2101 aagcaaggtg tagcagctca gctagattta ttactgtgca cgaaagtaaa tacctatctc 2161 aattattctt tttcttttcc aatataaagt ttgctgaatg tacaagaaga gtttatcact 2221 taggatatag aattttttta ggggttgggg gaggggatct gttaggaaac tgttacctat 2281 aaacaaagat tgactggatt cgatccaaaa gataaaactt gaagctattc tggaactaac 2341 atggaaaaat gaaatggcta ttgtttaaaa aaatgataga aatacattgt tgatgggata 2401 tgagttaagt ttattttcta caaactgtaa ttgatgagga catggataat atcttcatgt 2461 ttctgagaag taatctgtat gtggggggag gggataataa atatttctac ccccccaaaa 2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //