LOCUS BC015880 957 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens STT3, subunit of the oligosaccharyltransferase
complex, homolog B (S. cerevisiae), mRNA (cDNA clone
IMAGE:4722264), complete cds.
ACCESSION BC015880
VERSION BC015880.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 957)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 957)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: p Column: 8
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..957
/db_xref="H-InvDB:HIT000037373"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4722264"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..957
/gene="STT3B"
/gene_synonym="FLJ90106"
/gene_synonym="SIMP"
/gene_synonym="STT3-B"
/db_xref="GeneID:201595"
/db_xref="HGNC:HGNC:30611"
/db_xref="MIM:608605"
CDS 80..757
/gene="STT3B"
/gene_synonym="FLJ90106"
/gene_synonym="SIMP"
/gene_synonym="STT3-B"
/codon_start=1
/product="STT3B protein"
/protein_id="AAH15880.1"
/db_xref="GeneID:201595"
/db_xref="HGNC:HGNC:30611"
/db_xref="MIM:608605"
/translation="MSWWDYGYQIAGMANRTTLVDNNTWNNSHIALVGKAMSSNETAA
YKIMRTLDVDYVLVIFGGVIGYSGDDINKFLWMVRIAEGEHPKDIRESDYFTPQGEFR
VDKAGSPTLLNCLMYKMSYYRFGEMQLDFRTPPGFDRTRNAEIGNKDIKFKHLEEAFT
SEHWLVRIYKVKAPDNRETLDHKPRVTNIFPKQKYLSKKTTKRKRGYIKNKLVFKKGK
KIFKKTV"
BASE COUNT 338 a 156 c 205 g 258 t
ORIGIN
1 gggcaccagg aatatcttag atgattttag agaagcttac ttttggctaa ggcaaaatac
61 agatgaacat gcacgagtaa tgtcttggtg ggattatggc tatcagatag ctggaatggc
121 taatagaact acgttggtgg ataataacac ctggaataac agccacatag cactggtggg
181 aaaagctatg tcttctaatg aaacagcagc ctataaaatc atgaggactc tagatgtaga
241 ttatgttttg gttatttttg gaggggttat tggctattct ggtgatgata tcaacaaatt
301 tctctggatg gttaggatag ctgaaggaga acatcccaaa gacattcggg aaagtgacta
361 ttttacccca cagggagaat tccgtgtaga caaagcagga tcccctactt tgttgaattg
421 ccttatgtat aaaatgtcat actacagatt tggagaaatg cagctggatt ttcgtacacc
481 cccaggtttt gaccgaacac gtaatgctga gattggaaat aaggacatta aattcaaaca
541 tttggaagaa gcctttacat cagaacactg gcttgttagg atatataaag taaaagcacc
601 tgataacagg gagacattag atcacaaacc tcgagtcacc aacattttcc caaaacagaa
661 gtatttgtca aagaagacta ccaaaaggaa gcgtggctac attaaaaata agctggtttt
721 taagaaaggc aagaaaatat ttaagaagac tgtttaaatg cactgttctg gttcctaact
781 tgaagcagtt gtccttgtga gaaccggtct ttgcctttag ctcatgtcgt gtttcacagc
841 aaagagggta cagaaccatc actggtccag gttaatgtac aaaattttct ggcaatgcct
901 gattaaaaaa ataaaattgg cttgttgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//