LOCUS       BC015877                1924 bp    mRNA    linear   HUM 06-OCT-2003
DEFINITION  Homo sapiens cadherin 19, type 2, mRNA (cDNA clone MGC:27490
            IMAGE:4716394), complete cds.
ACCESSION   BC015877
VERSION     BC015877.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CLONTECH
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 38 Row: o Column: 10.
FEATURES             Location/Qualifiers
     source          1..1924
                     /db_xref="H-InvDB:HIT000037371"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:27490 IMAGE:4716394"
                     /tissue_type="Liver"
                     /clone_lib="NIH_MGC_76"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1924
                     /gene="CDH19"
                     /gene_synonym="CDH7"
                     /gene_synonym="CDH7L2"
                     /db_xref="GeneID:28513"
                     /db_xref="MIM:603016"
     CDS             355..1527
                     /gene="CDH19"
                     /gene_synonym="CDH7"
                     /gene_synonym="CDH7L2"
                     /codon_start=1
                     /product="CDH19 protein"
                     /protein_id="AAH15877.1"
                     /db_xref="GeneID:28513"
                     /db_xref="MIM:603016"
                     /translation="MNTTSHHIGQLRSDLDNGNNSFQYKLLGAGAGSTFIIDERTGDI
                     YAIQKLDREERSLYILRAQVIDIATGRAVEPESEFVIKVSDINDNEPKFLDEPYEAIV
                     PEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQPYFSVEPTTGVIRISSKMDRE
                     LQDEYWVIIQAKDMIGQPGALSGTTSVLIKLSDVNDNKPIFKESLYRLTVSESAPTGT
                     SIGTIMAYDNDIGENAEMDYSIEEDDSQTFDIITNHETQEGIVILKKKVDFEHQNHYG
                     IRAKVKNHHVPEQLMKYHTEASTTFIKIQVEDVDEPPLFLLPYYVFEVFEETPQGSFV
                     GVVSATDPDNRKSPIRYSITRSKVFNINDNGTITTSNSLDREISAWYNLSITATEK"
     misc_feature    391..627
                     /gene="CDH19"
                     /gene_synonym="CDH7"
                     /gene_synonym="CDH7L2"
                     /note="CA; Region: Cadherin repeats. Cadherins are
                     glycoproteins involved in Ca2+-mediated cell-cell
                     adhesion. Cadherin domains occur as repeats in the
                     extracellular regions which are thought to mediate
                     cell-cell contact when bound to calcium"
                     /db_xref="CDD:smart00112"
     misc_feature    697..951
                     /gene="CDH19"
                     /gene_synonym="CDH7"
                     /gene_synonym="CDH7L2"
                     /note="CA; Region: Cadherin repeats. Cadherins are
                     glycoproteins involved in Ca2+-mediated cell-cell
                     adhesion. Cadherin domains occur as repeats in the
                     extracellular regions which are thought to mediate
                     cell-cell contact when bound to calcium"
                     /db_xref="CDD:smart00112"
     misc_feature    970..1275
                     /gene="CDH19"
                     /gene_synonym="CDH7"
                     /gene_synonym="CDH7L2"
                     /note="cadherin; Region: Cadherin domain"
                     /db_xref="CDD:pfam00028"
     misc_feature    1312..1518
                     /gene="CDH19"
                     /gene_synonym="CDH7"
                     /gene_synonym="CDH7L2"
                     /note="cadherin; Region: Cadherin domain"
                     /db_xref="CDD:pfam00028"
BASE COUNT          652 a          352 c          388 g          532 t
ORIGIN      
        1 ggggagagaa cccaaaatag cattgagtaa gcagtgacat actgacagtg ttgtggtact
       61 aaaagcacaa gcgtctgtaa ctctgggcaa tggggcacat cgagagtttg ctgagaagac
      121 tgtgaagcaa aaagaagaaa gtttttccta ctcttcctta tgtgtccaac acgaagtttg
      181 ctgttcagtt ttcacagaac ttctagaagt tgaagttaca aaggaattcc tctcctatgg
      241 ccttgtcttg gagcaacaga aaactctcaa acaaagaaag tcaagcagcc agtgcgatct
      301 catttgagag tgaagcgtgg ctgggtgtgg aaccaatttt ttgtaccaga ggaaatgaat
      361 acgactagtc atcacatcgg ccagctaaga tctgatttag acaatggaaa caattctttc
      421 cagtacaagc ttttgggagc tggagctgga agtactttta tcattgatga aagaacaggt
      481 gacatatatg ccatacagaa gcttgataga gaggagcgat ccctctacat cttaagagcc
      541 caggtaatag acatcgctac tggaagggct gtggaacctg agtctgagtt tgtcatcaaa
      601 gtttcggata tcaatgacaa tgaaccaaaa ttcctagatg aaccttatga ggccattgta
      661 ccagagatgt ctccagaagg aacattagtt atccaggtga cagcaagtga tgctgacgat
      721 ccctcaagtg gtaataatgc tcgtctcctc tacagcttac ttcaaggcca gccatatttt
      781 tctgttgaac caacaacagg agtcataaga atatcttcta aaatggatag agaactgcaa
      841 gatgagtatt gggtaatcat tcaagccaag gacatgattg gtcagccagg agcgttgtct
      901 ggaacaacaa gtgtattaat taaactttca gatgttaatg acaataagcc tatatttaaa
      961 gaaagtttat accgcttgac tgtctctgaa tctgcaccca ctgggacttc tataggaaca
     1021 atcatggcat atgataatga cataggagag aatgcagaaa tggattacag cattgaagag
     1081 gatgattcgc aaacatttga cattattact aatcatgaaa ctcaagaagg aatagttata
     1141 ttaaaaaaga aagtggattt tgagcaccag aaccactacg gtattagagc aaaagttaaa
     1201 aaccatcatg ttcctgagca gctcatgaag taccacactg aggcttccac cactttcatt
     1261 aagatccagg tggaagatgt tgatgagcct cctcttttcc tccttccata ttatgtattt
     1321 gaagtttttg aagaaacccc acagggatca tttgtaggcg tggtgtctgc cacagaccca
     1381 gacaatagga aatctcctat caggtattct attactagga gcaaagtgtt caatatcaat
     1441 gataatggta caatcactac aagtaactca ctggatcgtg aaatcagtgc ttggtacaac
     1501 ctaagtatta cagccacaga aaaatgatat agggatgctg tattccttga agattacatt
     1561 tcaaagagat ggtcaccatt acttgataaa tacaatcctg gatcctaaag cttccaagaa
     1621 acttgttgaa cttttgaaag atttccatac gcttcaaagg gacaaagaaa aaacttacat
     1681 acaaagcttt ttttttccct ctctctctct ctttctctgt gtgtgtgtgt gtgtgtgtgt
     1741 gtgtgtgtat gaatgctctg agaaaaggaa ggaaagaaaa aatattttcc cttgctttca
     1801 acaagtacaa ggcctctaat ttttaatttg ttttgttctt tcaaattatc attgcaaata
     1861 gtacatatat tttaaataaa aacactaaaa caaactaaaa aaaaaaaaaa aaaaaaaaaa
     1921 aaaa
//