LOCUS BC015803 2088 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon regulatory factor 2, mRNA (cDNA clone
MGC:9260 IMAGE:3920890), complete cds.
ACCESSION BC015803
VERSION BC015803.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2088)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2088)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC015803.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4755144.
FEATURES Location/Qualifiers
source 1..2088
/db_xref="H-InvDB:HIT000037335"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9260 IMAGE:3920890"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2088
/gene="IRF2"
/gene_synonym="IRF-2"
/db_xref="GeneID:3660"
/db_xref="HGNC:HGNC:6117"
/db_xref="MIM:147576"
CDS 8..1057
/gene="IRF2"
/gene_synonym="IRF-2"
/codon_start=1
/product="interferon regulatory factor 2"
/protein_id="AAH15803.1"
/db_xref="GeneID:3660"
/db_xref="HGNC:HGNC:6117"
/db_xref="MIM:147576"
/translation="MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARH
GWDVEKDAPLFRNWAIHTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKG
NNAFRVYRMLPLSERPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAV
LTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSE
LYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPG
MASFVTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRETRASV
IKKTSDITQARVKSC"
BASE COUNT 605 a 495 c 447 g 541 t
ORIGIN
1 gggcaccatg ccggtggaaa ggatgcgcat gcgcccgtgg ctggaggagc agataaactc
61 caacacgatc ccggggctca agtggcttaa caaggaaaag aagatttttc agatcccctg
121 gatgcatgcg gctagacatg ggtgggatgt ggaaaaagat gcaccactct ttagaaactg
181 ggcaatccat acaggaaagc atcaaccagg agtagataaa cctgatccca aaacatggaa
241 ggcgaatttc agatgcgcca tgaattcctt gcctgatatt gaagaagtca aggataaaag
301 cataaagaaa ggaaataatg ccttcagggt ctaccgaatg ctgcccctat cagaacggcc
361 ttctaagaaa ggaaagaaac caaagacaga aaaagaagac aaagttaagc acatcaagca
421 agaaccagtt gagtcatctc tggggcttag taatggagta agtgatcttt ctcctgagta
481 tgcggtcctg acttcaacta taaaaaatga agtggatagt acggtgaaca tcatagttgt
541 aggacagtcc catctggaca gcaacattga gaatcaagag attgtcacca atccgccaga
601 catttgccaa gttgtagagg tgaccactga gagcgacgag cagccggtca gcatgagcga
661 gctctaccct ctgcagatct cccccgtgtc ttcctatgca gaaagcgaaa cgactgatag
721 tgtgcccagc gatgaagaga gtgccgaggg gcggccacac tggcggaaga ggaatattga
781 aggcaaacag tacctcagca acatggggac tcgaggctcc tacctgctgc ccggcatggc
841 gtccttcgtc acttccaaca aaccggacct ccaggtcacc atcaaagagg agagcaatcc
901 ggtgccttac aacagctcct ggcccccttt tcaagacctc cccctttctt cctccatgac
961 cccagcatcc agcagcagtc ggccagaccg ggagacccgg gccagcgtca tcaagaaaac
1021 atcggatatc acccaggccc gcgtcaagag ctgttaagcc tctgactctc cgcggtggtt
1081 gttggggctt cttggctttg ttttgttgtt tgtttgtatt ttattttttt ctctctgaca
1141 cctattttag acaaatctaa gggaaaaagc cttgacaata gaacattgat tgctgtgtcc
1201 aactccagta ctggagcttc tctttaactc aggactccag cccattggta gacgtgtgtt
1261 tctagagcct gctggatctc ccagggctac tcactcaagt tcaaggacca acaagggcag
1321 tggaggtgct gcattgcctg cggtcaaggc cagcaaggtg gagtggatgc ctcagaacgg
1381 acgagataat gtgaactagc tggaattttt tattcttgtg aatatgtaca taggcagcac
1441 tagcgacatt gcagtctgct tctgcacctt atcttaaagc acttacagat aggccttctt
1501 gtgatcttgc tctatctcac agcacactca gcaccccctt ctctgcccat tccccagcct
1561 ctcttcctat cccatcccat cccatcccat cccatcccat cccgctcttt tcctactttt
1621 ccttccctca aagcttccat tccacatccg gaggagaaga aggaaatgaa tttctctaca
1681 gatgtcccat tttcagactg ctttaaaaaa aatccttcta atctgctatg cttgaatgcc
1741 acgcggtaca aaggaaaaag tatcatggaa atattatgca aattcccaga tttgaagaca
1801 aaaatactct aattctaacc agagcaagct tttttatttt ttatacaggg gaatatttta
1861 ttcaaggtaa aattctaaat aaaatataat tgttttttat cttttctaca gcaaatttat
1921 aattttaaga ttccttttct tgtttatcag cagttgttat tacatccttg tggcacattt
1981 tttttttaat tttgtaaagg tgaaaaaagc ttttatgagc tcatgtagca atcagatttt
2041 cctgtggatt gataataaat gaatatgata tataaaaaaa aaaaaaaa
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