LOCUS BC015796 1512 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens Ly1 antibody reactive homolog (mouse), mRNA (cDNA
clone MGC:8861 IMAGE:3911275), complete cds.
ACCESSION BC015796
VERSION BC015796.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1512)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1512)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015796.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923397.
FEATURES Location/Qualifiers
source 1..1512
/db_xref="H-InvDB:HIT000037330"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8861 IMAGE:3911275"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1512
/gene="LYAR"
/gene_synonym="ZLYAR"
/db_xref="GeneID:55646"
/db_xref="HGNC:HGNC:26021"
CDS 204..1343
/gene="LYAR"
/gene_synonym="ZLYAR"
/codon_start=1
/product="Ly1 antibody reactive homolog (mouse)"
/protein_id="AAH15796.1"
/db_xref="GeneID:55646"
/db_xref="HGNC:HGNC:26021"
/translation="MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDD
YKNHVKCISEDQKYGGKGYEGKTHKGDIKQQAWIQKISELIKRPNVSPKVRELLEQIS
AFDNVPRKKAKFQNWMKNSLKVHNESILDQVWNIFSEASNSEPVNKEQDQRPLHPVAN
PHAEISTKVPASKVKDAVEQQGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQ
KPKKRKKGQEADLEAGGEEVPEANGSAGKRSKKKKQRKDSASEEEARVGAGKRKRRHS
EVETDSKKKKMKLPEHPEGGEPEDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRK
KVLAQYYTVTDEHHRSEEELLVIFNKKISKNPTFKLLKDKVKLVK"
BASE COUNT 542 a 272 c 378 g 320 t
ORIGIN
1 gcctgagagg caggtagctg cggcgctggg ctggcggcgg cgagtccacg tgctccccgc
61 ggccggttga aaccgttggc gggcgctggc tgagaggcaa tgtttgctgt cttccattgg
121 agtgactgaa tttctacatg acggcttttt gacaagactt aaaacctgtc ttggatagag
181 aatatttagc catttaccta aaaatggtat tttttacatg caatgcatgt ggtgaatcag
241 tgaagaaaat acaagtggaa aagcatgtgt ctgtttgcag aaactgtgaa tgcctttctt
301 gcattgactg cggtaaagat ttctggggcg atgactataa aaaccacgtg aaatgcataa
361 gtgaagatca gaagtatggt ggcaaaggct atgaaggtaa aacccacaaa ggcgacatca
421 aacagcaggc gtggattcag aaaattagtg aattaataaa gagacccaat gtcagcccca
481 aagtgagaga acttttagag caaattagtg cttttgacaa cgttcccagg aaaaaggcaa
541 aatttcagaa ttggatgaag aacagtttaa aagttcataa tgaatccatt ctggaccagg
601 tgtggaatat cttttctgaa gcttccaaca gcgaaccagt caataaggaa caggatcaac
661 ggccactcca cccagtggca aatccacatg cagaaatctc caccaaggtt ccagcctcca
721 aagtgaaaga cgccgtggaa cagcaagggg aggtgaagaa gaataaaaga gaaagaaagg
781 aagaacggca gaagaaaagg aaaagagaaa agaaagaact aaagttagaa aaccaccagg
841 aaaactcaag gaatcagaag cctaagaagc gcaaaaaggg acaggaggct gaccttgagg
901 ctggtgggga ggaagtccct gaggccaatg gctctgcagg gaagaggagc aagaagaaga
961 agcagcgcaa ggacagcgcc agtgaggaag aggcacgcgt gggcgcaggg aagaggaagc
1021 ggaggcactc ggaagttgaa acagattcta agaagaaaaa gatgaagctc ccagagcatc
1081 ctgagggcgg agaaccagaa gacgatgagg ctcctgcaaa aggtaaattc aactggaagg
1141 gaactattaa agcaattctg aaacaggccc cagacaatga aataaccatc aaaaagctaa
1201 ggaaaaaggt tttagctcag tactacacag tgacagatga gcatcacaga tccgaagagg
1261 aactcctggt catctttaac aagaaaatca gcaagaaccc tacctttaag ttattaaagg
1321 acaaagtcaa gcttgtgaaa tgaacatttg tgtatttaaa aattgaatcc attctgctga
1381 cttcttcctt tcactgctgt ttataaaatg tgtaatgaat tctaacaact caaattttgc
1441 tttttgaagc tgtattttta agttaagaaa aaatatattt ttggtataac ttttatgaaa
1501 aaaaaaaaaa aa
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