LOCUS BC015729 3714 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens transducin-like enhancer of split 3 (E(sp1) homolog,
Drosophila), mRNA (cDNA clone IMAGE:4906791), with apparent
retained intron.
ACCESSION BC015729
VERSION BC015729.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3714)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3714)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: p Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3714
/db_xref="H-InvDB:HIT000037278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4906791"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 736 a 1251 c 1107 g 620 t
ORIGIN
1 gttcagacct cgtgctcgtc cccttcgcct gtctgtgtgt ggtatccgta ggtccggggc
61 actttttttt tggtgtgtgt gtgtgtgtgc gtgcgcgcgt gtgtgtgtgt tgggtgtgtg
121 tgttttgggg gtttgccggg gcgcggagag gagagccggg ccgaggggaa ggaaggaagc
181 cgtagagctc cccggtctcg ggctgcgtct cccctccagc gctctcctgc ctgtgcgctc
241 cgacgcggca gcggcggtgg cgctgagcgc tcctcggtgg ggacgcggtg ctcaagctgg
301 gagcagcgag aaccctttgc ggaggcttcc cgtgcccgct ggacttagga tgccagggcg
361 tttgatttgc acctactgag cccggagttc ctccccggcc ctgggaaggg cttgcagcgg
421 cggcggcggc ggcggcagcg gcagtagcag acggaacagc aggctctcct ctccgagggg
481 gggcgtcgaa gcgcccgcgc cgggctcccg ccctcaccct ccggcgctcc tgcggcccca
541 agccaccacc tcgtagcccg cctccttcct cttctcgccg cgagccccag gcccggacgc
601 ctctaggatc ggacccgcgc gccccggatg cttggggctg ccccggcgcg cccccctaca
661 ggcgcgaccc gctgagtgac ccggaggggg cccgagctcg ccccaggagg ggcccccggc
721 ctcgggaccc cgcgccggac ctgctgggga gccgacgatg tccgcgcagt cccaggcatt
781 gacgcgctcg acgcagccca gggaaggcgg ccggccgctg cccgccgagc cctaggcgca
841 caaagcccgc gcccgccgcc cggccccggc gcccgccgac gactttgccg cctgctccgc
901 ggctctttgt ctccacttgg ggcgggcgcc cgactctggg atttcgctgc gagaacgagc
961 tgggggggcc gggggcgagc tctcggtttc ccggccgccc cccgctcggg ctcggctccc
1021 ccctcccccg cacctccccg gcccgggctc tcggcgcttc cacgctctcg gaatcacgac
1081 ccctccctgc catgtatccg cagggcagac atccggctcc ccatcaaccc gggcagccgg
1141 gatttaaatt cacggtggct gagtcttgtg acaggatcaa agacgaattc cagttcctgc
1201 aagctcagta tcacagcctc aaagtggagt acgacaagct ggcaaacgag aagacggaga
1261 tgcagcgcca ttatgtgatg tactatgaga tgtcctatgg cttgaacatt gaaatgcaca
1321 agcagacaga gattgcgaag agactgaaca caattttagc acagatcatg cctttcctgt
1381 cacaagagca ccagcagcag gtggcgcagg cagtggagcg cgccaagcag gtcaccatga
1441 cggagctgaa cgccatcatc gggcagcagc agctccaggc gcagcacctc tcccatgcca
1501 cacacggccc cccggtccag ttgccacccc acccgtcagg tctccagcct ccaggaatcc
1561 ccccagtgac agggagcagc tccgggctgc tggcactggg cgccctgggc agccaggccc
1621 atctgacggt gaaggatgag aagaaccacc atgaactcga tcacagagag agagaatcca
1681 gtgcgaataa ctctgtgtca ccctcggaaa gcctccgggc cagtgagaag caccggggct
1741 ctgcggacta cagcatggaa gccaagaagc ggaaggcgga ggagaaggac agcttgagcc
1801 gatacgacag tgatggggac aagagtgatg atctggtggt ggatgtttcc aatgaggacc
1861 ccgcaacgcc ccgggtcagc ccggcacact cccctcctga aaatgggctg gacaaggccc
1921 gtagcctgaa aaaagatgcc cccaccagcc ctgcctcggt ggcctcttcc agtagcacac
1981 cttcctccaa gaccaaagac cttggtcata acgacaaatc ctccacccct gggctcaagt
2041 ccaacacacc aaccccaagg aacgacgccc caactccagg caccagcacg accccagggc
2101 tcaggtcgat gccgggtaaa cctccgggca tggacccgat agcctcggct ctgcgcacgc
2161 ccatctccat caccagctcc tatgcggcgc ccttcgccat gatgagccac catgagatga
2221 acggctccct caccagtcct ggcgcctacg ccggcctcca caacatccca ccccagatga
2281 gcgccgccgc cgctgctgca gccgctgcct atggccgatc gccaatggtt ggttttgacc
2341 ctcacccccc gatgcgggcc acaggcctcc cctcaagcct ggcctccatt cctggaggaa
2401 aaccagcgta ctcattccat gtgagtgctg atgggcagat gcagcccgtg cccttccccc
2461 acgacgccct ggcaggcccc ggcatcccga ggcacgcccg gcagatcaac acactcagcc
2521 acggggaggt ggtgtgtgcc gtgaccatca gcaaccccac gaggcacgtc tacacaggtg
2581 gcaagggctg cgtgaagatc tgggacatca gccagccagg cagcaagagc cccatctccc
2641 agctggactg cctgaacagg gacaattaca tccgctcctg caagctgctc cctgatgggc
2701 gcacgctcat cgtgggcggc gaggccagca cgctcaccat ctgggacctg gcctcaccca
2761 cgccccgcat caaggccgag ctgacgtcct cggctcccgc ctgttatgcc ctggccatta
2821 gccctgacgc caaagtctgc ttctcctgct gcagcgatgg gaacattgct gtctgggacc
2881 tgcacaacca gaccctggtc aggcagttcc agggccacac agatggggcc agctgcatag
2941 acatctccca tgatggcacc aaactgtgga cagggggcct ggacaacaca gtgcgctcct
3001 gggacctgcg ggagggccga cagctacagc agcatgactt cacttcccag atcttctcgc
3061 tgggctactg ccccactggg gagtggctgg ctgtgggcat ggagagcagc aacgtggagg
3121 tgctgcacca caccaagcct gacaagtacc agctgcacct gcacgagagc tgcgtgctct
3181 ccctcaagtt cgcctactgc ggcaagtggt tcgtgagcac tgggaaagat aaccttctca
3241 acgcctggag gacgccttat ggagccagca tattccagtc taaagaatcc tcgtctgtct
3301 tgagttgtga catttcagcg gatgacaaat acattgtaac aggctctggt gacaagaagg
3361 ccacagttta tgaggtcatc tactaaacaa gaactccagc agggctgtca aactctggga
3421 gaaaccgact cggctctgac agggagaccc ccaggcgagg ggccccgagg atggcggagg
3481 atgggccgca ggcagccgag cgttcagggc tgcgctccgg ccggctgaga gggcacgtgc
3541 cccgtcacag tctggactcc tgggcctgga ttgatgtgtc tcacagactc ggaagggttc
3601 tgctcctcct cctccccctg aacaatgctg gcagttgcta caaatagatt tattggaggc
3661 ttatggctcc ggttccccca caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//