LOCUS BC015668 3489 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone
IMAGE:4328688), partial cds.
ACCESSION BC015668
VERSION BC015668.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3489)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015668.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..3489
/db_xref="H-InvDB:HIT000088767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4328688"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>3489
/gene="C14orf43"
/gene_synonym="c14_5541"
/db_xref="GeneID:91748"
CDS 418..>3489
/gene="C14orf43"
/gene_synonym="c14_5541"
/codon_start=1
/product="C14orf43 protein"
/protein_id="AAH15668.1"
/db_xref="GeneID:91748"
/translation="MNLQAQPKAQNKRKRCLFGGQEPAPKEQPPPLQPPQQSIRVKEE
QYLGHEGPGGAVSTSQPVELPPPSSLALLNSVVYGPERTSAAMLSQQVASVKWPNSVM
APGRGPERGGGGGVSDSSWQQQPGQPPPHSTWNCHSLSLYSATKGSPHPGVGVPTYYN
HPEALKREKAGGPQLDRYVRPMMPQKVQLEVGRPQAPLNSFHAAKKPPNQSLPLQPFQ
LAFGHQVNRQVFRQGPPPPNPVAAFPPQKQQQQQQPQQQQQQQQAALPQMPLFENFYS
MPQQPSQQPQDFGLQPAGPLGQSHLAHHSMAPYPFPPNPDMNPELRKALLQDSAPQPA
LPQVQIPFPRRSRRLSKEGILPPSALDGAGTQPGQEATGNLFLHHWPLQQPPPGSLGQ
PHPEALGFPLELRESQLLPDGERLAPNGREREAPAMGSEEGMRAVSTGDCGQVLRGGV
IQSTRRRRRASQEANLLTLAQKAVELASLQNAKDGSGSEEKRKSVLASTTKCGVEFSE
PSLATKRAREDSGMVPLIIPVSVPVRTVDPTEAAQAGGLDEDGKGPEQNPAEHKPSVI
VTRRRSTRIPGTDAQAQAEDMNVKLEGEPSVRKPKQRPRPEPLIIPTKAGTFIAPPVY
SNITPYQSHLRSPVRLADHPSERSFELPPYTPPPILSPVREGSGLYFNAIISTSTIPA
PPPITPKSAHRTLLRTNSAEVTPPVLSVMGEATPVSIEPRINVGSRFQAEIPLMRDRA
LAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLHES
RGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQ
KLIQTKTVAQCVEFYYTYKKQVKIGRNGTLTFGDVDTSDEKSAQEEVEVDIKTSQKFP
RVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQEKEEQEEGRERSRRAAAVKATQ
TLQANESASDILILRSHESNAPGSAGGQASEKPREGTGKSRRALPFSKKKKK"
misc_feature 2914..3045
/gene="C14orf43"
/gene_synonym="c14_5541"
/note="SANT; Region: SANT SWI3, ADA2, N-CoR and TFIIIB''
DNA-binding domains"
/db_xref="CDD:smart00717"
BASE COUNT 781 a 1123 c 1048 g 537 t
ORIGIN
1 cgcgggctgg cggaagcccc gcgagcgccg cggggaggcg acggcgcctg tttgttttta
61 aaatcgggag tgcgtgcagg cggctggagt cccggaggcg accgaaggcg gcgacccgcg
121 gcggaagggg gacagccgag cccggagccc ggagcccggg caagagctgg gtgccagaac
181 cctgtggagc atcatgaact gggaagagta gctgagcccc agagcctctc tggaagagaa
241 aggaagagcc agcagttctt tctcccagtg tcccacctca ctgtccagcg tcttcctctg
301 cccctgctct gccctccctg gctcctggac tagagcccgg cttccagcag gacgtttccc
361 caggggatgg gcgactgttg aaggggatct caccgccagg gctcagttgg ccacatcatg
421 aacctccagg cccagcccaa ggctcagaac aagcggaagc gttgcctctt cgggggccag
481 gaaccagctc ccaaggagca gccccctccc ctgcagcccc cccagcagtc catcagagtg
541 aaggaggagc agtacctcgg gcacgagggt ccaggagggg cagtctccac ctctcagcct
601 gtggaactgc cccctcctag cagcctggcc ctgctgaact ctgtggtgta tgggcctgag
661 cggacctcag cagccatgct gtcccagcag gtggcctcag taaagtggcc caactctgtg
721 atggctccag ggcggggccc ggagcgtgga ggaggtgggg gtgtcagtga cagcagctgg
781 cagcagcagc caggccagcc tccaccccat tcaacatgga actgccacag tctgtccctc
841 tacagtgcaa ccaaggggag cccgcatcct ggagtgggag tcccgactta ctataaccac
901 cctgaggcac tgaagcggga gaaagcgggg ggcccacagc tggaccgcta tgtgcgacca
961 atgatgccac agaaggtgca gctggaggta gggcggcccc aggcacccct gaattctttc
1021 cacgcagcca agaaaccccc aaaccagtca ctgcccctgc aacccttcca gctggcattc
1081 ggccaccagg tgaaccggca ggtcttccgg cagggcccac cgcccccaaa cccggtggct
1141 gccttccctc cacagaagca gcagcagcag cagcaaccac agcagcagca gcagcagcag
1201 caggcagccc taccccagat gccgctcttt gagaacttct attccatgcc gcagcaaccc
1261 tcgcagcaac cccaggactt tggcctgcag ccagctgggc cactgggaca gtcccacctg
1321 gctcaccaca gcatggcacc ctaccccttc ccccccaacc cagatatgaa cccagaactg
1381 cgcaaggccc ttctgcagga ctcagccccg cagccagcgc tacctcaggt ccagatcccc
1441 ttcccccgcc gctcccgccg cctctctaag gagggtatcc tgcctcccag cgccctggat
1501 ggggctggca cccagcctgg gcaggaggcc actggcaacc tgttcctaca tcactggccc
1561 ctgcagcagc cgccacctgg ctccctgggg cagccccatc ctgaagctct gggattcccg
1621 ctggagctga gggagtcgca gctactgcct gatggggaga gactagcacc caatggccgg
1681 gagcgagagg ctcctgccat gggcagcgag gagggcatga gggcagtgag cacaggggac
1741 tgtgggcagg tgctacgggg cggagtgatc cagagcacgc gacggaggcg ccgggcatcc
1801 caggaggcca atttgctgac cctggcccag aaggctgtgg agctggcctc actgcagaat
1861 gcaaaggatg gcagtggttc tgaagagaag cggaaaagtg tattggcctc aactaccaag
1921 tgtggggtgg agttttctga gccttcctta gccaccaagc gagcacgaga agacagtggg
1981 atggtacccc tcatcatccc agtgtctgtg cctgtgcgaa ctgtggaccc aactgaggca
2041 gcccaggctg gaggtcttga tgaggacggg aagggtcctg aacagaaccc tgctgagcac
2101 aagccatcag tcatcgtcac ccgcaggcgg tccacccgaa tccccgggac agatgctcaa
2161 gctcaggcag aggacatgaa tgtcaagttg gagggggagc cttccgtgcg gaaaccaaag
2221 cagcggccca ggcccgagcc cctcatcatc cccaccaagg cgggcacttt catcgcccct
2281 cccgtctact ccaacatcac cccataccag agccacctgc gctctcccgt gcgcctagct
2341 gaccacccct ctgagcggag ctttgagcta cctccctaca cgccgccccc catcctcagc
2401 cctgtgcggg aaggctctgg cctctacttc aatgccatca tatcaaccag caccatccct
2461 gcccctcctc ccatcacgcc taagagtgcc catcgcacgc tgctccggac taacagtgct
2521 gaagtaaccc cgcctgtcct ctctgtgatg ggggaggcca ccccagtgag catcgagcca
2581 cggatcaacg tgggctcccg gttccaggca gaaatcccct tgatgaggga ccgtgccctg
2641 gcagctgcag atccccacaa ggctgacttg gtgtggcagc catgggagga cctagagagc
2701 agccgggaga agcagaggca agtggaagac ctgctgacag ccgcctgctc cagcattttc
2761 cctggtgctg gcaccaacca ggagctggcc ctgcactgtc tgcacgaatc cagaggagac
2821 atcctggaaa cgctgaataa gctgctgctg aagaagcccc tgcggcccca caaccatccg
2881 ctggcaactt atcactacac aggctctgac cagtggaaga tggccgagag gaagctgttc
2941 aacaaaggca ttgccatcta caagaaggat ttcttcctgg tgcagaagct gatccagacc
3001 aagaccgtgg cccagtgcgt ggagttctac tacacctaca agaagcaggt gaaaatcggc
3061 cgcaatggga ctctaacctt tggggatgtg gatacgagcg atgagaagtc ggcccaggaa
3121 gaggttgaag tggatattaa gacttcccaa aagttcccaa gggtgcctct tcccagaaga
3181 gagtccccaa gtgaagagag gctggagccc aagagggagg tgaaggagcc caggaaggag
3241 ggggaggagg aggtgccaga gatccaagag aaggaggagc aggaagaggg gcgagagcgc
3301 agcaggcggg cagcggcagt caaagccacg cagacactac aggccaatga gtcggccagt
3361 gacatcctca tcctccggag ccacgagtcc aacgcccctg ggtctgccgg tggccaggcc
3421 tcggagaagc caagggaagg gacagggaag tcacgaaggg cactaccttt ttcaaaaaaa
3481 aaaaaaaaa
//