LOCUS BC015636 1371 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens hedgehog interacting protein, mRNA (cDNA clone
IMAGE:4139148), partial cds.
ACCESSION BC015636
VERSION BC015636.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1371)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1371)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC015636.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1371
/db_xref="H-InvDB:HIT000088757"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4139148"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 330 a 378 c 337 g 326 t
ORIGIN
1 gaagctgcag ccgccggcag aggagacctc agcatcatct agagcccagc gctggccctg
61 cctccgcctg ccccgccgcc gccgtcgccg tttctgttcc tgctactgtc ccacctaaac
121 aactcccgtt acacggacaa gtgaacatct gtggctgtcc tctccttttc ttcctcctct
181 tccaactcct tctcctcctc ccacttccca gccgcagcag aaagccccca acccaactga
241 cactggcaca actgcaaacg gtgtcatccg cacaacttta tctcgctcct cgggctcccc
301 taaggcattg gacccatcgc cgcgtctttt attttttgca aagttgcatc gctgtacata
361 tttttgtccc cgccacctcc ctctgtctct ggagtgccct acagccccgc aaactcctcc
421 tggagctgcg ccctagtgcc cctgctgggc agtggcgttc ccccccatcc tcccgcgccc
481 agcccctgct gctctgggca gacgatgctg aagatgctct cctttaagct gctgctgctg
541 gccgtggctc tgggcttctt tgaaggagat gctaagtttg gggaaagaaa cgaagggagc
601 ggagcaagga ggagaaggtg cctgaatggg aaccccccga agcgcctgaa aaggagagac
661 aggaggatga tgtcccagct ggagctgctg agtgggggag agatgctgtg cggtggcttc
721 taccctcggc tgtcctgctg cctgcggagt gacagcccgg ggctagggcg cctggagaat
781 aagatatttt ctgttaccaa caacacagaa tgtgggaagt tactggagga aatcaaatgt
841 gcactttgct ctccacattc tcaaagcctg ttccactcac ctgagagaga agtcttggaa
901 agagacctag tacttcctct gctctgcaaa gactattgca aagaattctt ttacacttgc
961 cgaggccata ttccaggttt ccttcaaaca actgcggatg agttttgctt ttactatgca
1021 agaaaagatg gtgggttgtg ctttccagat tttccaagaa aacaagtcag aggaccagca
1081 tctaactact tggaccagat ggaagaatat gacaaagtgg aagagatcag cagaaagcac
1141 aaacacaact gcttctgtat tcaggaggtt gtgagtgggc tgcggcagcc cgttggtgcc
1201 ctgcatagtg gggatggctc gcaacgtctc ttcattctgg aaaaagaagg ttatgtgaag
1261 atacttaccc ctgaaggaga aattttcaag gagccttatt tggacattca caaacttgtt
1321 caaagtggaa taaaggttgg ctttttaaat tttaaaaaaa aaaaaaaaaa a
//