LOCUS BC015626 1257 bp mRNA linear HUM 16-DEC-2006 DEFINITION Homo sapiens par-6 partitioning defective 6 homolog alpha (C. elegans), mRNA (cDNA clone MGC:22974 IMAGE:4844008), complete cds. ACCESSION BC015626 VERSION BC015626.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1257) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1257) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC015626.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 33 Row: o Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8394416. FEATURES Location/Qualifiers source 1..1257 /db_xref="H-InvDB:HIT000037225" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22974 IMAGE:4844008" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1257 /gene="PARD6A" /gene_synonym="PAR-6A" /gene_synonym="PAR6" /gene_synonym="PAR6alpha" /gene_synonym="PAR6C" /gene_synonym="TAX40" /gene_synonym="TIP-40" /db_xref="GeneID:50855" /db_xref="HGNC:HGNC:15943" /db_xref="MIM:607484" CDS 72..1109 /gene="PARD6A" /gene_synonym="PAR-6A" /gene_synonym="PAR6" /gene_synonym="PAR6alpha" /gene_synonym="PAR6C" /gene_synonym="TAX40" /gene_synonym="TIP-40" /codon_start=1 /product="par-6 partitioning defective 6 homolog alpha (C. elegans)" /protein_id="AAH15626.1" /db_xref="GeneID:50855" /db_xref="HGNC:HGNC:15943" /db_xref="MIM:607484" /translation="MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSR LLRAVHQIPGLDVLLGYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGL AFASNSLQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLH KHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVN GIEVAGKTLDQVTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPD SDDDSSDLVIENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGS RIRGDGSGFSL" BASE COUNT 232 a 404 c 387 g 234 t ORIGIN 1 gccggccggg ctgtgcacct gcgcctcggc gggccgcctg gggcaccgtc cccggcccgc 61 ccggccccgc catggcccgg ccgcagagga ctccggcgcg cagtcccgat agcatcgtcg 121 aggtgaagag caaatttgac gccgagttcc gacgcttcgc gctgcctcgc gcttcggtga 181 gcggcttcca ggagttctcg cggttgctgc gggcggtgca ccagatcccg ggcctggacg 241 tgctacttgg ctatacggat gctcatggcg acctgctgcc cctcaccaac gacgacagcc 301 tgcaccgggc cctggccagc gggcccccgc cactgcgcct actggtgcag aagcgggaag 361 ctgactccag cggcctggct tttgcctcca actctctgca gcggcgcaag aaagggctct 421 tgctgcggcc agtggcaccc ctgcgcaccc ggccaccctt gctaatcagc ctgccccaag 481 atttccgcca ggtttcctca gtcatagacg tggacctact gcctgagacc caccgacggg 541 tgcggctgca caagcatggt tcagaccgcc ccctgggctt ctacatccga gatggcatga 601 gcgtgcgtgt ggctccccag ggcctggagc gggttccagg aatcttcatc tcccgcctgg 661 tacgtggggg tctggctgag agtacagggc tgctggcggt cagtgatgag atcctcgagg 721 tcaatggcat tgaagtagcc gggaagacct tggaccaagt gacggacatg atggttgcca 781 acagccataa cctcattgtc actgtcaagc ccgccaacca gcgcaataac gtggtgcgag 841 gggcatctgg gcgtttgaca ggtcctccct ctgcagggcc tgggcctgct gagcctgata 901 gtgacgatga cagcagtgac ctggtcattg agaaccgcca gcctcccagt tccaatgggc 961 tgtctcaggg gcccccgtgc tgggacctgc accctggctg ccgacatcct ggtacccgca 1021 gctctctgcc ctccctggat gaccaggagc aggccagttc tggctggggg agtcgcattc 1081 gaggagatgg tagtggcttc agcctctgac agtcaggatg aagccccatg ccactccaca 1141 ctgctgggac atggcaggga cttcacagtg ggggttttta gctggctcac agggctccct 1201 cagcctgggg aacattaaag gttttctaca aatacagtca aaaaaaaaaa aaaaaaa //