LOCUS BC015603 821 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens interferon, alpha-inducible protein 6, mRNA (cDNA
clone MGC:23426 IMAGE:4654295), complete cds.
ACCESSION BC015603
VERSION BC015603.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 821)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 821)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015603.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..821
/db_xref="H-InvDB:HIT000037210"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23426 IMAGE:4654295"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..821
/gene="IFI6"
/gene_synonym="6-16"
/gene_synonym="FAM14C"
/gene_synonym="IFI-6-16"
/gene_synonym="IFI616"
/db_xref="GeneID:2537"
/db_xref="HGNC:HGNC:4054"
/db_xref="MIM:147572"
CDS 77..469
/gene="IFI6"
/gene_synonym="6-16"
/gene_synonym="FAM14C"
/gene_synonym="IFI-6-16"
/gene_synonym="IFI616"
/codon_start=1
/product="interferon, alpha-inducible protein 6"
/protein_id="AAH15603.1"
/db_xref="GeneID:2537"
/db_xref="HGNC:HGNC:4054"
/db_xref="MIM:147572"
/translation="MRQKAVSLFLCYLLLFTCSGVEAGKKKCSESSDSGSGFWKALTF
MAVGGGLAVAGLPALGFTGAGIAANSVAASLMSWSAILNGGGVPAGGLVATLQSLGAG
GSSVVIGNIGALMGYATHKYLDSEEDEE"
BASE COUNT 191 a 223 c 219 g 188 t
ORIGIN
1 cagcaggctc cgggctgaag attgcttctc ttctctcctc caaggtctag tgacggagcc
61 cgcgcgcggc gccaccatgc ggcagaaggc ggtatcgctt ttcttgtgct acctgctgct
121 cttcacttgc agtggggtgg aggcaggtaa gaaaaagtgc tcggagagct cggacagcgg
181 ctccgggttc tggaaggccc tgaccttcat ggccgtcgga ggaggactcg cagtcgccgg
241 gctgcccgcg ctgggcttca ccggcgccgg catcgcggcc aactcggtgg ctgcctcgct
301 gatgagctgg tctgcgatcc tgaatggggg cggcgtgccc gccggggggc tagtggccac
361 gctgcagagc ctcggggctg gtggcagcag cgtcgtcata ggtaatattg gtgccctgat
421 gggctacgcc acccacaagt atctcgatag tgaggaggat gaggagtagc cagcagctcc
481 cagaacctct tcttccttct tggcctaact cttccagtta ggatctagaa ctttgccttt
541 tttttttttt tttttttttt ttgagatggg ttctcactat attgtccagg ctagagtgca
601 gtggctattc acagatgcga acatagtaca ctgcagcctc caactcctag cctcaagtga
661 tcctcctgtc tcaacctccc aagtaggatt acaagcatgc gccgacgatg cccagaatcc
721 agaactttgt ctatcactct ccccaacaac ctagatgtga aaacagaata aacttcaccc
781 agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//