LOCUS BC015564 1791 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cold shock domain protein A, mRNA (cDNA clone
MGC:12695 IMAGE:4137643), complete cds.
ACCESSION BC015564
VERSION BC015564.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1791)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1791)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: k Column: 3.
FEATURES Location/Qualifiers
source 1..1791
/db_xref="H-InvDB:HIT000037186"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12695 IMAGE:4137643"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1791
/gene="CSDA"
/gene_synonym="CSDA1"
/gene_synonym="DBPA"
/gene_synonym="ZONAB"
/db_xref="GeneID:8531"
/db_xref="HGNC:HGNC:2428"
/db_xref="MIM:603437"
CDS 193..1311
/gene="CSDA"
/gene_synonym="CSDA1"
/gene_synonym="DBPA"
/gene_synonym="ZONAB"
/codon_start=1
/product="cold shock domain protein A"
/protein_id="AAH15564.1"
/db_xref="GeneID:8531"
/db_xref="HGNC:HGNC:2428"
/db_xref="MIM:603437"
/translation="MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAA
APAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRN
GYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP
DGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSG
ARNQLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQ
LQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYN
YRRRPRPPNAPSQDGKEAKAGEAPTENPAPPTQQSSAE"
BASE COUNT 480 a 529 c 477 g 305 t
ORIGIN
1 ccaagagcga gcgcgcagca cgaagctcga gccgcctccg ccgcgcgacc ccacctcggc
61 cgccgccgcc tgcgccgcga gatccgcccc ggcctccccg agagcgagcc ccggccgccg
121 cgaccaccag ccgcgctaac cgccgaccaa ccgccaccga ggcgcctgag cgagagcaga
181 ggaggaggag gcatgagtga ggcgggcgag gccaccacca ccaccaccac caccctcccg
241 caggctccga cggaggcggc cgccgcggct ccccaggacc ccgcgcccaa gagcccggtg
301 ggcagcggtg cgccccaggc cgcggccccg gcgcccgccg cccacgtcgc aggaaacccc
361 ggtggggacg cggcccccgc agccacgggc accgcggccg ccgcctcttt agccaccgcc
421 gccggcagcg aagacgcgga gaaaaaagtt ctcgccacca aagtccttgg cactgtcaaa
481 tggttcaacg tcagaaatgg atatggattt ataaatcgaa atgacaccaa agaagatgta
541 tttgtacatc agactgccat caagaagaat aacccacgga aatatctgcg cagtgtagga
601 gatggagaaa ctgtagagtt tgatgtggtt gaaggagaga agggtgcaga agctgccaat
661 gtgactggcc cggatggagt tcctgtggaa gggagtcgtt acgctgcaga tcggcgccgt
721 tacagacgtg gctactatgg aaggcgccgt ggccctcccc ggaattacgc tggggaggag
781 gaggaggaag ggagcggcag cagtgaagga tttgaccccc ctgccactga taggcagttc
841 tctggggccc ggaatcagct gcgccgcccc cagtatcgcc ctcagtaccg gcagcggcgg
901 ttcccgcctt accacgtggg acagaccttt gaccgtcgct cacgggtctt accccatccc
961 aacagaatac aggctggtga gattggagag atgaaggatg gagtcccaga gggagcacaa
1021 cttcagggac cggttcatcg aaatccaact taccgcccaa ggtaccgtag caggggacct
1081 cctcgcccac gacctgcccc agcagttgga gaggctgaag ataaagaaaa tcagcaagcc
1141 accagtggtc caaaccagcc gtctgttcgc cgtggatacc ggcgtcccta caattaccgg
1201 cgtcgcccgc gtcctcctaa cgctccttca caagatggca aagaggccaa ggcaggtgaa
1261 gcaccaactg agaaccctgc tccacccacc cagcagagca gtgctgagta acaccaggct
1321 cctcaggcac cttcaccatc ggcaggtgac ctaaagaatt aatgaccatt cagaaataaa
1381 gcaaaaagca ggccacaacc ttaaccaaca ccaaagaaac atccaagcaa taaagtggaa
1441 gactaaccaa gatttggaca ttggaatgtt tactgttatt ctttaagaaa caactacaaa
1501 aagaaaatgt caacaaattt ttccagcaag ctgagaacct gggaattcct gcacggaaga
1561 caagagagta gcctctccag tttcagcaac cgctaggttt ctattttttt tcctggtttt
1621 tactgttttg gtaatatata tattgaaaca agaaatatta ataccacatg gggagaaccc
1681 caaccaaaga aatctgaaat atatagtaaa tgcttttttt tccgtttttg ttcattttgg
1741 atgctggtgc taaacctcca agtgtcatga tttaaaaaaa aaaaaaaaaa a
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