LOCUS BC015552 2033 bp mRNA linear HTC 24-FEB-2004
DEFINITION Homo sapiens ankyrin repeat domain 27 (VPS9 domain), mRNA (cDNA
clone IMAGE:3848796), with apparent retained intron.
ACCESSION BC015552
VERSION BC015552.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2033)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2033)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: k Column: 2
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2033
/db_xref="H-InvDB:HIT000088732"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3848796"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 586 a 444 c 472 g 531 t
ORIGIN
1 tccccctcct gctgaagcac ggggccaacg caggtgccag gaacgcagac caagccgtcc
61 cgctccacct ggcctgccag cagggccact ttcaggtggt gaagtgtctg ttagattcga
121 atgcaaaacc caataagaag gacctcagtg gaaacacgcc cctcatttat gcctgctccg
181 gtggccatca cgagcttgtg gcactgctgc tacagcacgg ggcctccatt aacgcttcta
241 acaataaggg caacacagcg ctgcacgagg ctgtgattga aaagcacgtc ttcgtggtag
301 agctgcttct gctccacgga gcgtcagttc aggtgctgaa caagcggcag cgcacggctg
361 tagactgtgc tgaacagaat tcaaaaataa tggaattgct tcaggtggta ccaagctgtg
421 ttgcttcatt agatgatgtg gctgaaactg accgcaagga gtatgtcact gttaagatca
481 ggaaaaaatg gaactcaaaa ctgtatgatc taccagatga gccttttaca agacagtttt
541 actttgtcca ctcagctggt cagtttaagg gaaagacttc aagggagatt atggcaagag
601 atagaagtgt ccctaattta accgaaggtt ctttgcatga gccagggagg caaagtgtca
661 cactgagaca gaataacctg ccagctcaga gtggatctca tgctgctgag aaaggcaaca
721 gcgactggcc agagaggcct ggactgacac agactggccc tggacacaga cggatgctgc
781 ggagacacac ggtagaggat gcggtcgtgt cccagggccc ggaggctgct ggccccctct
841 ccactcccca agaggttagt gcttcccggt cctaacagga atgaggagtt gttgaaccca
901 ctgctatgaa gcaaggatgc aacaagatga tgctgagcgt gaacacatct gagaactaaa
961 tgtgcttcca tgagactggc ttgagaagtc ttcagcacca agttcctgaa agcttttctg
1021 tggcaggaaa gaatgcaaca aaaaagttaa ccaccaccat ctctctcctc ttcaaagcta
1081 atgaatacaa ttgaaacaga caaaaattcc agtagcatcc agatccttaa gccagaggtg
1141 catgcttctt tttaagtatg agggtttgtt ggtcacagtg ggagaggttt caccaccgca
1201 ttctgacctc ctcctcccaa aaggtgctaa acctctctga cctgtgtaca ttcacaaacc
1261 acagctagaa ttcctccacc taggattaag ctggagagaa gtaagtaatt taggtttcat
1321 ggtactgtag aggccaggct gaaatgtcat atctgaagga agaaagcagc agctggacaa
1381 tgtttctttg caaagcaaca ctcgaaccaa aagatgcctc aatcccattt tgatattcat
1441 tttagtgaaa ggatgcatca gacctgttcc acatcatgca catgggaaag ggtggttatc
1501 attttccttc taacaagtag gtacagatat tcggttacta cacgtgcacc tgtagcagtg
1561 tttctagaaa catccctttt tgttgagaac ctcccttgaa tgtctgtcac actcacacct
1621 gacgggatgg ttactggatt agagagtaga tttggcacat cttttcttag tcttttgatt
1681 caaattcaaa acttaacagc acaaaccagg tcagagttac tttcggttag aatttattgc
1741 catttattcc tttttataaa tttctataga ttatactgtt atttttatgt tattggcaga
1801 gctacacgta tatgggtttg tcctgagtcc gttttcaaat gaccttgtga ttgataggga
1861 aatggttttg tccatgttct tggaaatact tgtgtatgta cagaagggag ggattatttt
1921 tctacaaagt aatttatgat ttctaatttt ctaatgtgcc ttggatatgt gccaaatgat
1981 ggaaaagaaa cagtaaactt tatgattctt gaaaaaaaaa aaaaaaaaaa aaa
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