LOCUS BC015504 1399 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SCO cytochrome oxidase deficient homolog 1 (yeast),
mRNA (cDNA clone MGC:9115 IMAGE:3914068), complete cds.
ACCESSION BC015504
VERSION BC015504.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC015504.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759067.
FEATURES Location/Qualifiers
source 1..1399
/db_xref="H-InvDB:HIT000037147"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9115 IMAGE:3914068"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1399
/gene="SCO1"
/db_xref="GeneID:6341"
/db_xref="HGNC:HGNC:10603"
/db_xref="MIM:603644"
CDS 17..922
/gene="SCO1"
/codon_start=1
/product="SCO cytochrome oxidase deficient homolog 1
(yeast)"
/protein_id="AAH15504.1"
/db_xref="GeneID:6341"
/db_xref="HGNC:HGNC:10603"
/db_xref="MIM:603644"
/translation="MAMLVLVPGRVMRPLGGQLWRFLPRGLEFWGPAEGTARVLLRQF
CARQAEAWRASGRPGYCLGTRPLSTARPPPPWSQKGPGDSTRPSKPGPVSWKSLAITF
AIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKTDKDYLGQWL
LIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVK
EFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY
FGQNKRKGEIAASIATHMRPYRKKS"
BASE COUNT 408 a 323 c 365 g 303 t
ORIGIN
1 gcggtctccg aggctcatgg cgatgctggt cctagtaccc ggacgagtta tgcggcctct
61 gggtggccaa ctttggcgct tcttgcctcg cggactcgag ttttggggcc cagccgaggg
121 gactgcgaga gtcttgctga ggcagttctg cgcgcggcaa gcggaggcgt ggcgtgcctc
181 ggggcgccct ggctattgcc tgggaacccg gcccctcagc actgcgaggc cgccaccccc
241 gtggtcgcag aagggccccg gagactccac gcgcccctcg aagcccgggc ctgtttcctg
301 gaagtcttta gcaatcacat ttgctattgg aggagcttta ctggctggaa tgaagcacgt
361 caagaaagaa aaggcagaga agttagagaa ggaacggcag cgacacatcg gcaagccttt
421 acttggggga ccgttttccc tcacaactca tactggggag cgtaaaactg acaaggacta
481 cttgggtcag tggttattga tttattttgg cttcactcat tgccctgatg tctgtccaga
541 agaactagaa aagatgattc aagtcgtgga tgaaatagat agcattacaa ctctgccaga
601 tctaactcca cttttcatca gcattgaccc agagagggac acaaaagaag ccatcgcaaa
661 ttatgtgaaa gaattttctc ccaaactggt tggcttgact ggcacgagag aagaggtcga
721 tcaagtggcc agagcataca gagtgtatta cagccctggc cccaaggacg aagatgaaga
781 ctacatagtg gatcacacaa taataatgta cttgattgga ccagatggtg agtttctaga
841 ttattttggc cagaacaaga ggaagggaga aatagctgct tcaattgcca cacacatgag
901 gccatacaga aaaaagagct agccaaagca gtgttgctgg atgcagtatt ctcttgctaa
961 gaggaaggaa actgtctcgc ataggagcct atataaatat aaacatatat acgtgcactc
1021 tacagaatgg ccttcatacc atgagaacat ttctgttttg gatggggatg ttacccttgc
1081 gttcaaccaa aattgattct tggaactgta aagattacaa cccaaagtct cccaggaagc
1141 tgtggggaga ccagaggatc aagctgaagt gaagccagtg aagagcccac ctgtggaagg
1201 acatggcggg gcgaggcaca gccagtgcat tcctgcctgc gaacaggccc tcccagcagc
1261 tttgccgcct ctccatcgtc ttgggccctt gctcaaatag ctgtgggact gaatttcaca
1321 gaaaagaata taatttccat agtgctcttg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaa
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