LOCUS BC015484 1464 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens calbindin 2, mRNA (cDNA clone MGC:8907 IMAGE:3847342),
complete cds.
ACCESSION BC015484
VERSION BC015484.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1464)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1464)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015484.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6031158.
FEATURES Location/Qualifiers
source 1..1464
/db_xref="H-InvDB:HIT000037137"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8907 IMAGE:3847342"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1464
/gene="CALB2"
/gene_synonym="CAL2"
/db_xref="GeneID:794"
/db_xref="HGNC:HGNC:1435"
/db_xref="MIM:114051"
CDS 56..871
/gene="CALB2"
/gene_synonym="CAL2"
/codon_start=1
/product="calbindin 2"
/protein_id="AAH15484.1"
/db_xref="GeneID:794"
/db_xref="HGNC:HGNC:1435"
/db_xref="MIM:114051"
/translation="MAGPQQQPPYLHLAELTASQFLEIWKHFDADGNGYIEGKELENF
FQELEKARKGSGMMSKSDNFGEKMKEFMQKYDKNSDGKIEMAELAQILPTEENFLLCF
RQHVGSSTEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTIL
RMFDLNGDGKLGLSEMSRLLPVQENFLLKFQGMKLTSEEFNAIFTFYDKDRSGYIDEH
ELDALLKDLYEKNKKEMNIQQLTNYRKSVMSLAEAGKLYRKDLEIVLCSEPPM"
BASE COUNT 381 a 397 c 387 g 299 t
ORIGIN
1 gcccagccgg cgcggagcgg gagcggtgca ggctgaggtc tccgagcggc tcgccatggc
61 tggcccgcag cagcagcccc cttacctgca cctggccgag ctgacggcgt cccagttcct
121 ggaaatatgg aagcactttg acgcagacgg aaatgggtat attgaaggta aagagctaga
181 aaactttttc caagagctgg agaaggcaag gaaaggctct ggcatgatgt caaagagtga
241 caactttgga gaaaagatga aggagttcat gcagaagtat gataaaaact cagatgggaa
301 aatcgagatg gcagagctgg cgcagatcct gccaaccgaa gagaacttcc ttctgtgctt
361 caggcagcac gtgggctcca gcaccgagtt tatggaggct tggcggaagt acgacacaga
421 caggagtggc tacatcgaag ccaatgagct caagggattc ctgtcagacc tgctgaagaa
481 ggcgaaccgg ccgtacgatg agcccaagct ccaggaatac acccaaacca tactacggat
541 gtttgacttg aacggggatg gcaaattggg cctctcagag atgtcccgac tcctgcctgt
601 ccaggaaaac ttcctgctta aatttcaggg catgaagctg acctcagagg agtttaacgc
661 gatcttcaca ttttacgaca aggatagaag cggctacatt gacgagcatg agctggatgc
721 ccttttgaag gatctgtacg agaaaaacaa aaaggaaatg aatattcaac agctcaccaa
781 ctacagaaag agcgtcatgt ccttggcaga ggcagggaag ctctaccgca aggacctgga
841 gattgtgctc tgcagcgagc cccccatgta aagtggggac gggggctgct tctccacctc
901 ccccaaaccc tgcttctgct gccctgatgc gtctacccag actcagagac cgtgagcgcc
961 ccgcccccac ccctacagcc tgcacacacc tgcctgcaga gcaggaaacg agagatagag
1021 gatgggcagc tggggggctg tcctgagccc cctgcaccca cccctgccca ggcagtcttt
1081 gctcagtgga tcacacacat ggaaggtgat gggggcatgg gtggagggtc cctaattctc
1141 ttcgctgtga tgcatgagct ccctcgctgt atgatttagg cttctatgtc caacagagtg
1201 gactcttccc tctcgctccc ctctgccggt cccccatgcc accacccacc ccaaacttcc
1261 aggttccatc caccaccttg ccaatggtgt agctgtcctc tcagaactcc tgtgtgtgga
1321 aggcacccgc cctttccttg ccttctttac tcggcgtgct ccttttctct ttgggtttct
1381 tgtttaccaa agaagagttt acagacaata aaatggaaag gtcctgctgt ggaaacttaa
1441 aaaaaaaaaa aaaaaaaaaa aaaa
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