LOCUS BC015480 3896 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens membrane-associated ring finger (C3HC4) 5, mRNA (cDNA clone MGC:8860 IMAGE:3905766), complete cds. ACCESSION BC015480 VERSION BC015480.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3896) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3896) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: p Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58532582. FEATURES Location/Qualifiers source 1..3896 /db_xref="H-InvDB:HIT000037134" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8860 IMAGE:3905766" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3896 /gene="MARCH5" /gene_synonym="FLJ20445" /gene_synonym="MARCH-V" /db_xref="GeneID:54708" /db_xref="HGNC:HGNC:26025" CDS 293..1129 /gene="MARCH5" /gene_synonym="FLJ20445" /gene_synonym="MARCH-V" /codon_start=1 /product="membrane-associated ring finger (C3HC4) 5" /protein_id="AAH15480.1" /db_xref="GeneID:54708" /db_xref="HGNC:HGNC:26025" /translation="MPDQALQQMLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQ ACLQRWVDEKQRGNSTARVACPQCNAEYLIVFPKLGPVVYVLDLADRLISKACPFAAA GIMVGSIYWTAVTYGAVTVMQVVGHKEGLDVMERADPLFLLIGLPTIPVMLILGKMIR WEDYVLRLWRKYSNKLQILNSIFPGIGCPVPRIPAEANPLADHVSATRILCGALVFPT IATIVGKLMFSSVNSNLQRTILGGIAFVAIKGAFKVYFKQQQYLRQAHRKILNYPEQE EA" BASE COUNT 1135 a 682 c 812 g 1267 t ORIGIN 1 ggcgcccgcg gtccatggac cggaacctcg ggccgacgga cgggaacccg ggccgcgatc 61 gccgcctccc cgcctcaggc tcctcctcct cgctctccgc cgcctccgcc ggactcccgc 121 aggccctgca ccgccgccgc caggctagcg gagctgcccc gggaagctgg gtgacgggtt 181 cgcggctgcc gccggactgc ggcctactcc gccgcctctc agtgctattg tccctgggcc 241 tggccttgag cgggtccact ggggaaggcc gtgtgcgccg gctccgcgga agatgccgga 301 ccaagcccta cagcagatgc tggacagaag ttgctgggtt tgttttgcta ctgatgaaga 361 tgatagaaca gctgaatggg tgagaccatg caggtgcaga ggatctacaa aatgggttca 421 ccaggcctgt ctacaacgct gggtggatga aaagcaaaga ggaaacagta cagccagagt 481 ggcatgtcct cagtgcaatg ctgaatacct aatagttttt ccaaaattgg gtccagtggt 541 ttacgtcttg gatcttgcag atagactgat ctcaaaagcc tgtccatttg ctgcagcagg 601 aataatggtc ggctctatct attggacagc tgtgacttat ggagcagtga cagtgatgca 661 ggttgtaggt cataaagaag gtctggatgt tatggagaga gctgatcctt tattcctttt 721 aattggactt cctactattc ctgtcatgct gatattaggc aagatgattc gctgggagga 781 ctatgtgctt agactgtggc gcaaatactc gaataaacta caaattttaa atagtatatt 841 tccagggata ggttgtcctg ttcctcgaat tccagctgag gccaatcctt tagcagatca 901 tgtctctgct actcgaatct tgtgtggagc ccttgtcttt cctactattg ctacaatagt 961 tggtaaattg atgttcagta gtgttaactc taatttacaa aggacaatct tgggtggaat 1021 tgcgtttgtt gccataaaag gagcatttaa agtttacttc aaacagcagc aatatttacg 1081 acaggcacac cgcaaaattc tgaattatcc agaacaagaa gaagcataaa actgacttct 1141 ggttgttctg cagttctctc atccttatga atctgttgtg ttgttttgat tccatcatta 1201 atgcacttgt ggagacttgt gataagctgc tgctcctata ttttttaaga aatataataa 1261 agcacttagg gcaggggaaa tcatctcggt aatcatggaa cctaaggatg tgatttgttt 1321 tcattgtttg tatgtactac ttttatggca gtcatatgaa ccattatctt agcatggtaa 1381 acctgggttt tgttcatatt ttctccagac agaaatgcaa agatcaaact gtgcaaatat 1441 taaaaaaatg cacatgctgt tttattcaaa tgcctctttt gtacatgttc atgtttagtg 1501 ttttctcaga atcagcaact caaggtacta tgaggatttt tctcactgac ataatttgat 1561 tacatactaa ataagaggat atgttaatat gaggaaatgt aaattaaatt agttataaat 1621 aaataaccaa aaatgtatgt aaacattcaa atgattatct gaacaaatga gattttgtgg 1681 tgttttcttt aacccatgtg atgtcctcca aaatgtgtag ggtaaaaatt cacagggctt 1741 ccagatcact ttttcaatat taaattttat ttacataatg ttgacatctc atacttcatg 1801 aagtaatttt gactcatgca gtcgtgtgtg tgtgtgtgtg tgtgtgtgtg tatttgtgtg 1861 tttcagtgtt tcatcaggtc cttccatctc tgggagtttt ttcaacccat atttctagaa 1921 attacagctg ccagtttata gtagtttgag cagaggatga tttgcaaaaa taaaaataaa 1981 gttattttac tctcctcttg cattgattca gttattgaga tattcgttga tcacctccta 2041 tttcccaggc actgtgcaga gtgctgtagg acatagtggt gaacaagaca gacttggtcc 2101 aagctcttac agagttgaca gtctagtttc agcacataga aaaccagcag tgaataaacc 2161 aaggtgaggc cttgagctct ttgtttttat attaatgagg agaaaagtat gaaaacaaga 2221 agtcttaagt aaatattgag gtcattgttt ttggcttaag tttattatag aaaatcaaca 2281 ctaatgtttt tagattttaa ttgtcctatt gatgaggcta gcaccttaat cactgtttag 2341 ttttgtattc atttttaaaa gcaattattg aagccatttt caatagattg gccattttaa 2401 tgttcagcaa cctgaatggt tatttttgtt aattaaaatt aaatttttaa gagatatttt 2461 caaaacccta tttattttct tgttcacagt aatgcatgtc aataataaat gtttcccctt 2521 actgataagc ggccacttta ggagtgtagc aaatatagat tgagctatgt tagtttgcaa 2581 taatatatgt taactttagt aattaaagac tggtttctat agtatgaatg tcttaatttt 2641 gagttatatg atgtttattt gaatgactgt tgaacattca aatttgtatt atttggagat 2701 gaagatttga ctaacagtga gccttattaa gaacactact acagttctga aggggaaata 2761 taacatctat ggttatatat tttaaaaact tagattatag gctgtaatta taaaatatat 2821 tggcttttgt tttcaatgtg aaagatacat taaatggaca catatcttgc aaaattttgt 2881 tgtatagaac agtttttagg cagcctttac taaagttatg caaacacaca gttccccatt 2941 tactacatta atgcccttga cagggagtag ctgcttggtt ttataggtat tagggctcat 3001 gaaggccggg gaacaactct aatccttttg gggcaggagg gagggttttt ttagggttgc 3061 ggggagggaa ctgcaagtgc ctgaggacca gagtggcctc tagccccgaa ttgaacactt 3121 ttaaacctaa agagccttat tattattagc tcgagaaata ccacatgcca gtcttcccag 3181 gaaggtgacc tgcctgacca tgaagcaaca aaagagcata ggcagactta aagttggata 3241 gacctgggtt caaatcatag ttcagctttc aataactgta tgtatgattt tggctaaagg 3301 atttgacttt ctctcaactg cagttttctt aatctttgaa atgcaaataa tgtttatctc 3361 agaagactat ttctaggatt aactgagaga ttaaaggaac agcagcactt aggctcaaaa 3421 tcgcccctac aaagcagtag ttgtttctta attgctaagt aatctgtttg cactctagga 3481 aaagtaaatg gagaggtaaa agaaaggcat tggggacaaa tgaaagagat gatgtagatt 3541 tttcggatgg gtgggtatat tttattttcc agtttatttt catatttctt tactgtgtta 3601 tttctggaaa ctttaatgtt ttaaacctct tttataaaat tcaatgacga ctactagaat 3661 tctattcttt tcaaaagtta acttatctcc aaagtggctg aaaatattgt ttaccattac 3721 atgattatga aatgactgtg aagaatataa aattaaactt agtgacttaa ttagtcactg 3781 ccttgctaac tttgctgtaa tttttttaaa cgtcttgttt ttaatatagc aaactatctc 3841 aatactggct ggattaggtt aaataaagaa tttttatgtt caaaaaaaaa aaaaaa //