LOCUS BC015453 1501 bp mRNA linear HUM 25-MAR-2004
DEFINITION Homo sapiens ankyrin repeat and MYND domain containing 2, mRNA
(cDNA clone IMAGE:4430313), partial cds.
ACCESSION BC015453
VERSION BC015453.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1501)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1501)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1501
/db_xref="H-InvDB:HIT000088694"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4430313"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1501
/gene="ANKMY2"
/gene_synonym="DKFZP564O043"
/gene_synonym="ZMYND20"
/db_xref="GeneID:57037"
CDS <1..488
/gene="ANKMY2"
/gene_synonym="DKFZP564O043"
/gene_synonym="ZMYND20"
/codon_start=3
/product="ANKMY2 protein"
/protein_id="AAH15453.1"
/db_xref="GeneID:57037"
/translation="LLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCG
EKGASKRCSVCKMVIYCDQTCQKTHWFTHKKICKNLKDIYEKQQLEAAKEKRQEENHG
KLDVNSNCVNEEQPEAEVGISQKDSNPEDSGEGKKESLESEAELEGLQDAPAGPQVSE
E"
misc_feature 120..233
/gene="ANKMY2"
/gene_synonym="DKFZP564O043"
/gene_synonym="ZMYND20"
/note="zf-MYND; Region: MYND finger"
/db_xref="CDD:pfam01753"
BASE COUNT 501 a 273 c 315 g 412 t
ORIGIN
1 cactcctcca gcagctggtt cgaagcattg ctcctgttga aattggttct gatcccactg
61 cattctccgt ccttacccaa gccatcactg gccaggtggg ttttgtggat gtggaatttt
121 gcactacctg tggagaaaag ggagcaagta aaagatgttc agtttgcaaa atggtaatat
181 attgtgatca aacctgccag aaaacacact ggtttactca taagaaaatc tgtaagaatc
241 tgaaggacat ttacgaaaag caacagttgg aggctgccaa agaaaagaga caagaggaaa
301 accacggcaa acttgatgtc aattctaact gtgttaatga agagcaacca gaggctgaag
361 taggtatctc tcaaaaggat tccaatcctg aagattccgg ggaaggaaag aaagaatctc
421 ttgaaagcga agctgagttg gaaggcttac aggatgctcc tgcagggcca caggtgtctg
481 aggagtaaaa gccagagcaa gtgccagtgt ggatgatcct caccctgcaa gaagctggaa
541 aactcctagg aatgcattgt cctcaccttg ttatacctgc gtggcaccat ggcaggattc
601 cacatttcat agaatacagg ttttcaagca aacccctgtt gaccatgccc taatttccta
661 ttgatttctg ttctataatt gaatggatat tcctatggaa aattttttgt ttcaaaatac
721 aggaaaaaca ttcctattac ctttctgagg ctggctttcc agcaattgtt tcaaaggaaa
781 atagatcccc ttaaagaaaa aatacaggct ttagggaaca aagggacaag cagaacaggt
841 gtggaagaga gattttcagg aagggaaaaa tttatagcta cagagggtag ttagaaaaat
901 cataacttat atgtgaataa aatacatata agcagcattt acggtagtgg cattctactt
961 attaagatgc aatgaaatga agaaaggctt tatgttcaag gacctttgcc atagttcagc
1021 taattgtagt tttatataga aatgatcctg aacactctga acttgacgta gtcctgcggt
1081 gatattctat ctgcagtatt tgtacctcca gaatggcaga tccctcagca ggaacaaagg
1141 catattgacg gttctctcag cgtatgcatt aaaaaaggta cttcctgaaa cttttgattc
1201 aataatgact aaacatacta tgtacacaat tactgtaagg ctaattcacg tgccatactc
1261 cacctgaaag cctgagttat cttgctataa gcttttcatg gagcacttcc tttccagaaa
1321 ctgatttgta actcatttag agaatgtcct ggcgtcggtt tttagcatat gtggtattta
1381 aacagagcta gaatgtgatg tctgaagata atgctgcatt tctgggtttc ttgtgtggat
1441 tttaaaataa attgtgccta caaatataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 a
//