LOCUS BC015417 1705 bp mRNA linear HUM 13-JAN-2004 DEFINITION Homo sapiens MAM domain containing 2, mRNA (cDNA clone IMAGE:4396073), complete cds. ACCESSION BC015417 VERSION BC015417.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1705) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1705) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC015417.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 27 Row: c Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23397567 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1705 /db_xref="H-InvDB:HIT000037117" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4396073" /tissue_type="Duodenum, adenocarcinoma" /clone_lib="NIH_MGC_88" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1705 /gene="MAMDC2" /gene_synonym="MGC21981" /db_xref="GeneID:256691" CDS 44..742 /gene="MAMDC2" /gene_synonym="MGC21981" /codon_start=1 /product="MAMDC2 protein" /protein_id="AAH15417.1" /db_xref="GeneID:256691" /translation="MQAEITFKKPMPTKVVFMSLCKSFWDCGLVALDDITIQLGSCSS SEKLPPPPGECTFEQDECTFTQEKRNRSSWHRRRGETPTSYTGPKGDHTTGVGYYMYI EASHMVYGQKARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDSEESLLWR RRGEQSISWLRALIEYSCERQHQIIFEAIRGVSIRSDIAIDDVKFQAGPCGEMEDTTQ QSSGYSEDLNEIEY" misc_feature 47..169 /gene="MAMDC2" /gene_synonym="MGC21981" /note="MAM; Region: Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)" /db_xref="CDD:smart00137" misc_feature 206..679 /gene="MAMDC2" /gene_synonym="MGC21981" /note="MAM; Region: MAM domain. An extracellular domain found in many receptors" /db_xref="CDD:pfam00629" BASE COUNT 578 a 282 c 323 g 522 t ORIGIN 1 ccacatggtt ctcttcaaag atgtaaactg ctagggtgtt tggatgcaag ctgaaatcac 61 ctttaagaag cccatgccta ccaaggtggt tttcatgagc ctatgcaaaa gtttctggga 121 ctgtgggctt gtagccctgg atgacattac aatacaattg ggaagctgct catcttcaga 181 gaaacttcca cctccacctg gagagtgtac tttcgagcaa gatgaatgta catttactca 241 ggagaaaaga aaccggagca gctggcacag gaggagggga gaaactccca cttcctacac 301 aggaccaaag ggagatcaca ctactggggt aggctactac atgtacattg aggcctccca 361 tatggtgtat ggacaaaaag cacgcctctt gtccaggcct ctgcgaggag tctctggaaa 421 acactgcttg acctttttct accacatgta tggagggggc actggcctgc tgagtgttta 481 tctgaaaaag gaagaagaca gtgaagagtc cctcttatgg aggagaagag gtgaacagag 541 catttcctgg ctacgagcac tgattgaata cagctgtgag aggcaacacc agataatttt 601 tgaagccatt cgaggagtat caataagaag tgatattgcc attgatgatg ttaaatttca 661 ggcaggaccc tgtggagaaa tggaagatac aactcaacaa tcatcaggat attctgagga 721 cttaaatgaa attgagtatt aagaaatgat ctgcattgga tttactagac gaaaaccata 781 cctctcttca atcaaaatga aaacaaagca aatgaatact ggacagtctt aacaatttta 841 taagttataa aatgacttta gagcaccctc cttcattact tttgcaaaaa catactgact 901 cagggctctt tttttctttt tgcatatgac aactgttact agaaatacag gctactggtt 961 ttgcatagat cattcatctt aattttggta ccagttaaaa atacaaatgt actatattgt 1021 agtcatttta aagtacacaa agggcacaat caaaatgaga tgcactcatt taaatctgca 1081 ttcagtgaat gtattgggag aaaaataggt cttgcaggtt tccttttgaa ttttaagtat 1141 cataaatatt ttttaagtaa ataatacggg gtgtcagtaa tatctgcaga atgaatgcag 1201 tctttcatgc taatgagtta gtctggaaaa ataaagtctt attttctatg ttttattcat 1261 agaaatggag tattaatttt taatattttc accatatgtg ataacaaagg atctttcatg 1321 aatgtccaag ggtaagtcag tattaattaa tgctgtatta caaggcaatg ctaccttctt 1381 tattccccct ttgaactacc tttgaagtca ctatgagcac atggatagaa atttaacttt 1441 tttttgtaaa gcaagcttaa aatgtttatg tatacatacc cagcaacttt tataaatgtg 1501 ttaaacaatt ttactgattt ttataataaa tattttggta agattttgaa taatatgaat 1561 tcaggcagat atactaaact gcttttattt acttgtttag aaaattgtat atatatgttt 1621 gtgtatccta acagctgcta tgaaattata aaattaccta ataaaaataa tttgaaaatc 1681 ttaaaaaaaa aaaaaaaaaa aaaaa //