LOCUS BC015402 1352 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens nephronophthisis 4, mRNA (cDNA clone IMAGE:4185589),
with apparent retained intron.
ACCESSION BC015402
VERSION BC015402.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: e Column: 23
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1352
/db_xref="H-InvDB:HIT000088659"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4185589"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 291 a 347 c 380 g 334 t
ORIGIN
1 ggccccttag ggccggcagc cgctttgtcc atctcaacct ggtggacgtg gattgccacc
61 agctggtggc ctcctggctc gtgtgcctct gctgccgcca gccgctcatc tccaaggcct
121 ttgagatcat gttggctgcg ggcgaaggga agggtgtcaa caagaggatc acctacacca
181 acccctaccc ctcccggagg acattccacc tgcacagcga ccacccggag ctgctgcggt
241 tcagagagga ctccttccag gtgtggtggg gctgtgcctg ggactcctag gggaagaccc
301 ggggacctga atggagggca gttagcctgc atttaggagc gagttcctca aatcaccagc
361 agtcttccaa aagccccagg gcggtgacag gtaccatccc atagttgggt gggcccgttg
421 tatctttagt agctggagat ttagcaaagt ttctcctgag tgtgggaaag ggtgttgtgc
481 ccagggcttt tcatggtaat gttagacagc tcagtctcgg aaataagtgt gccttcgagt
541 ccaagtaacg cgtcacactg gctgagcact ggttcccatc cttgtaccgg gcgctgaagt
601 caaaggcagg ccttggatgc acccgcaggg ctcccctgcc ttgtcagctc cccttggaaa
661 taaacacgac catgcagaga ggttgctggt gagagcgtgg gacagcccgg gggtggatgc
721 tgggatttgg atgcttattt ccaggtcggg ggtggagaga cctacaccat cggcttgcag
781 tttgcgccta gtcagagagt gggtgaggag gagatcctga tctacatcaa tgaccatgag
841 gacaaaaacg aagaggcatt ttgcgtgaag gtcatctacc agtgagggct tgagggtgac
901 gtccttcctg cggcacccag ctggggcctg tctgtgcccc tcctgccctg caggctgtcc
961 tccccgcctc tctgcagcct ttcacttcag tgcccacctg gctgacctgt gcacttggct
1021 gaggaagcag agaccgagcg ctggtcattt tgtagtacct gcatccagct tagctgctgc
1081 tgacacccag caggcctggg ttccgtgagc gcgaactccg tggtggtggg tctggctctg
1141 gtgctgccat ctacgcatgt gggaccctcg ttatcgctgt tgctcaaaat gtattttatg
1201 aatcatccta aatgagaaaa ttatgttttt cttactggat tttgtacaaa cataatctat
1261 tatttgctat gcaatatttt atgctggtat tatatctgtt ttttaaattg ttgaacaaaa
1321 tactaaactt ttaaaaaaaa aaaaaaaaaa aa
//