LOCUS BC015319 1952 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens polymerase (RNA) I polypeptide D, 16kDa, mRNA (cDNA
clone MGC:21099 IMAGE:3847651), complete cds.
ACCESSION BC015319
VERSION BC015319.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015319.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705739.
FEATURES Location/Qualifiers
source 1..1952
/db_xref="H-InvDB:HIT000037074"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21099 IMAGE:3847651"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1952
/gene="POLR1D"
/gene_synonym="MGC9850"
/gene_synonym="POLR1C"
/gene_synonym="RPA16"
/gene_synonym="RPA9"
/gene_synonym="RPAC2"
/gene_synonym="RPO1-3"
/db_xref="GeneID:51082"
/db_xref="HGNC:HGNC:20422"
CDS 115..483
/gene="POLR1D"
/gene_synonym="MGC9850"
/gene_synonym="POLR1C"
/gene_synonym="RPA16"
/gene_synonym="RPA9"
/gene_synonym="RPAC2"
/gene_synonym="RPO1-3"
/codon_start=1
/product="polymerase (RNA) I polypeptide D, 16kDa"
/protein_id="AAH15319.1"
/db_xref="GeneID:51082"
/db_xref="HGNC:HGNC:20422"
/translation="MEEDQELERKAIEELLKEAKRGKTRAETMGPMGWMKCPLASTNK
RFLINTIKNTLPSHKEQDHEQKEGDKEPAKSQAQKEENPKKHRSHPYKHSFRARGSAS
YSPPRKRSSQDKYEKRSNRR"
BASE COUNT 592 a 433 c 391 g 536 t
ORIGIN
1 tccgcgcctt ccgtcggtcg gtccttgctt cctgcttcgc ctccgcgcct cgcgctatgg
61 gacagagccc ccgatccgcc agcaccacct gaggatccag aaaccgcccc agcgatggaa
121 gaggatcagg agctggagag gaaagcaata gaagaactgc ttaaggaggc aaaacgtggg
181 aaaactagag ctgaaacaat gggacccatg ggttggatga agtgtcctct tgctagcacc
241 aataaaagat ttctaattaa cacaattaaa aacacattgc cctctcataa agagcaagac
301 catgaacaaa aagagggcga taaggaacca gcgaagagcc aggcccagaa agaagaaaac
361 ccgaagaaac acagaagcca tccttacaag cacagcttcc gcgctcgagg ttccgccagt
421 tactccccgc cacgaaagcg gagcagccag gacaagtacg aaaagcggtc caaccggcgg
481 tgaggctgga accagggcca gccagccctg cgggcctccg tgctccttcg gggtgcggtg
541 tgcggagaag gcctgagctg gcagggcaaa cacctgagag tgactttgac attaggtcct
601 ttgttgtttt taaagaggct gctggccaca ggcaaaaaaa atgacctagc aactcttgag
661 gaaacaagtg caaaggagga tgtcttggca agtttaagct acttctgcag tgtagtagac
721 ttacatattg ttgtttatct tgtttggaag tgtgtttcaa aataaacatg tctagaattt
781 aaagttttca gagattgtta aaactggttc caattttttg gtcatttctc agaaaaataa
841 aatacttata aatcctatat tttacttttt gggggtatta catttaaaat ttagaaatca
901 tcagtccagt gaccatattt atgaaaagct gtagccctcc aaggtctggg aatttatcga
961 gaagctcttt gatagctctg catttgtttt cccttaggtg aacaatgtag gaaatcctca
1021 aagtggcttt gaatttaatg ctccacttca gttaccagag gttaaaaatg ggttttgttg
1081 tttcctgtgc attctcaaac tcatttatta gatagaacaa tctttctata tttaattttt
1141 ttaatatata ggtcttaagt ggtgctttaa aaagaaccct cacaagttaa aaattaagag
1201 ttgtttcagt gctagatctt accagctaaa gacttgtgat accactatat agtatagttg
1261 ttccagaaat cttcatttta aatagaagtg tttacaatgc cttttttccc ccagtattgg
1321 ttttcaatac ctgttttcat atacaattac aaacctttca aacctgtatt ccttctttat
1381 actcaggaaa atgtcaccaa gcaccctcct ccccagttca caaaaggaag aagatgaaga
1441 ttctgtctcc ctgttccccc tccccagttt tccaaagtgt ctgagcatat gcctggctgt
1501 cctcagatca tcaccgtgcc acatccctgc tacttcctgg cagccaagaa aagccctttc
1561 tacatgctag aaggaaatac atccaaaaag ttagcattgg agtgttagaa actagaatag
1621 acctctccgc caccgagctg ctgtgtcacg ccctcagcct gctagggagt gacaaaccca
1681 agtcattctt gatccacccc ttctcccacc ccagatccca gggactcatc ctgtgacttt
1741 gtaaccacac tcattccttt caaacacaga ggaggaatta ttgcttcatc tgactttatt
1801 caaatctagt tatgtattgg cctaaattat ttgtgcaaaa tttgaaatgt tttttattta
1861 aatattagaa atagcacaaa gtcatggagt ttttaaaaat tgttataatt aagtaaaaat
1921 aaagctgaat tgtgtcaaaa aaaaaaaaaa aa
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