LOCUS BC015310 1980 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens CAP-GLY domain containing linker protein family,
member 4, mRNA (cDNA clone IMAGE:4431888), partial cds.
ACCESSION BC015310
VERSION BC015310.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1980)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1980)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: o Column: 8.
FEATURES Location/Qualifiers
source 1..1980
/db_xref="H-InvDB:HIT000037069"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4431888"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1980
/gene="CLIP4"
/db_xref="GeneID:79745"
/db_xref="HGNC:HGNC:26108"
CDS <1..1667
/gene="CLIP4"
/codon_start=3
/product="CLIP4 protein"
/protein_id="AAH15310.2"
/db_xref="GeneID:79745"
/db_xref="HGNC:HGNC:26108"
/translation="FFDPNDASCQEILFDPKTSVSELFAILRQWVPQVQQNIDIIGNE
ILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWT
NMNALHYAAYFDVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLL
EQGANPAFRNDKGQIPADVVPDPVDMPLEMADAAATAKEIKQMLLDAVPLSCNISKAM
LPNYDHVTGKAMLTSLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGK
NNGSVGKVQYFKCAPKYGIFAPLSKISKAKGRRKNITHTPSTKAAVPLIRSQKIDVAH
VTSKVNTGLMTSKKDSASESTLSLPPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQS
YPKKQNAISSNKKTMSKSPSLSSRASAGLNSSATSTANNSRCEGELRLGERVLVVGQR
LGTIRFFGTTNFAPVLGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQR
VTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFSK"
BASE COUNT 641 a 363 c 438 g 538 t
ORIGIN
1 ctttctttga tcctaatgat gcatcatgcc aggaaattct ttttgatccc aaaacttcag
61 tttcagaatt atttgccatt ttgagacagt gggttcctca ggtccaacaa aacattgaca
121 ttattggaaa tgagattctt aagagaggtt gcaatgtgaa tgatagagat ggattgacag
181 atatgactct tttacattat acctgcaaat ctggagctca tggtattggt gatgtggaaa
241 cagctgtaaa atttgcaact cagcttattg acctgggagc agacattagt ttgcggagtc
301 gctggacaaa catgaatgct ttgcattatg ctgcttattt tgatgtccct gaacttataa
361 gagtgatttt gaaaacgtcg aaaccaaaag atgtggatgc cacttgcagt gattttaatt
421 ttggaacagc tttgcatatt gcagcataca acttgtgtgc aggtgctgtg aagtgcctct
481 tggagcaggg agcaaatcct gcatttagga atgacaaagg acagatccct gctgatgttg
541 ttccagaccc agtagatatg ccgttagaga tggctgacgc cgcagccact gctaaggaaa
601 tcaagcagat gcttctagat gcggtgcctc tgtcatgtaa catctcaaag gccatgctcc
661 caaattatga tcatgtcact ggcaaggcaa tgcttacgtc acttggcctg aagttggggg
721 atcgtgttgt tattgcagga cagaaggttg gtacattaag attttgtgga acaactgaat
781 ttgcaagtgg gcagtgggct ggcattgaac tggatgaacc agaaggaaaa aataatggaa
841 gtgttggaaa agtccagtac tttaaatgtg cccccaagta tggtattttt gcacctcttt
901 caaagataag taaagcaaaa ggtcgaagga agaatataac acacactcct tctacaaaag
961 ctgctgtacc tctcatcagg tcccagaaaa ttgacgtagc tcatgtgacg tcaaaagtaa
1021 atactggatt aatgacatca aaaaaagata gtgcttctga gtcaacactt tcattgcctc
1081 ctggtgaaga acttaaaact gtgacagaga aagatgttgc cctgcttgga tctgtcagca
1141 gctgctcctc tacatcttct ttggaacaca gacagagcta ccccaagaaa cagaatgcaa
1201 tcagcagtaa caagaagaca atgagcaaaa gcccttccct ttcatccaga gccagtgctg
1261 gtttgaattc ctcagcaaca tctacagcaa ataatagccg ttgcgagggg gaactccgcc
1321 tcggagagag agtgttagtg gtaggacaga gactgggcac cattaggttc tttgggacaa
1381 caaacttcgc tccagttcta ggatattggt atggtataga gcttgaaaaa ccccatggca
1441 agaatgatgg ttcagttgga ggtgtgcagt attttagctg ttctccaaga tatggaatat
1501 ttgctccccc atccagggtg caaagagtaa cagattccct ggataccctt tcagaaattt
1561 cttcaaataa acagaaccat tcttatcctg gttttaggag aagttttagc acaacttctg
1621 cttcttccca aaaggagatt aacagaagaa atgctttttc caagtgagta ttaagaagat
1681 ttagaaaaac acctttcaag atgaacatga tgggattctg tgaagaaaga aaagtggagt
1741 gctgtatctt ttgcattgct tggtagagtt ttaacacgta ggagaaaagg tgtgataagt
1801 gtattgagaa gcgttcttcc tccctccttt gcaagcgcaa ttaaaaatgt caccagtgac
1861 taaaactagt gcactgcata tattttatct tcatagaggt cagaactgtt aataaaagtt
1921 aaaggaattt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//