LOCUS BC015179 1242 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sorting nexin 3, mRNA (cDNA clone MGC:10153 IMAGE:3905515), complete cds. ACCESSION BC015179 VERSION BC015179.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1242) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1242) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 22 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23111040. FEATURES Location/Qualifiers source 1..1242 /db_xref="H-InvDB:HIT000037037" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10153 IMAGE:3905515" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1242 /gene="SNX3" /gene_synonym="MGC17570" /gene_synonym="SDP3" /gene_synonym="SNX3A" /db_xref="GeneID:8724" /db_xref="HGNC:HGNC:11174" /db_xref="MIM:605930" CDS 104..592 /gene="SNX3" /gene_synonym="MGC17570" /gene_synonym="SDP3" /gene_synonym="SNX3A" /codon_start=1 /product="sorting nexin 3" /protein_id="AAH15179.1" /db_xref="GeneID:8724" /db_xref="HGNC:HGNC:11174" /db_xref="MIM:605930" /translation="MAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRG RFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLP FRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPSKIR HA" BASE COUNT 368 a 260 c 273 g 341 t ORIGIN 1 cgcgcgagcc ccgtgtcccc acggcgggca gcagcggcgg cggcggcggc tgaacgcgga 61 gggggcggag ggagcccgcg gcggcggcag cagctacagc gaaatggcgg agaccgtggc 121 tgacacccgg cggctgatca ccaagccgca gaacctgaat gacgcctacg gaccccccag 181 caacttcctc gagatcgatg tgagcaaccc gcaaacggtg ggggtcggcc ggggccgctt 241 caccacttac gaaatcaggg tcaagacaaa tcttcctatt ttcaagctga aagaatctac 301 tgttagaaga agatacagtg actttgaatg gctgcgaagt gaattagaaa gagagagcaa 361 ggtcgtagtt cccccgctcc ctgggaaagc gtttttgcgt cagcttcctt ttagaggaga 421 tgatggaata tttgatgaca attttattga ggaaagaaaa caagggctgg agcagtttat 481 aaacaaggtc gctggtcatc ctctggcaca gaacgaacgt tgtcttcaca tgtttttaca 541 agatgaaata atagataaaa gctatactcc atctaaaata agacatgcct gaaatttggc 601 aagaaggggc aaaaacgtga ctattaatga ttgataagca ccagtgaaga agttctaact 661 tttagcatgc tgcacagaaa ctggtataac atgccttcag tatactaaca ctcatatgct 721 cagttttgtt ttgttttggc agttgacaag aagttaattt gctttagtaa aaatccctca 781 ttccagcctt tctatataaa tagctctttc ttgctgtttt aatgtggtgc acactatagc 841 ctcacaaacc tgttattcca gtgtaatctg cagtgtcgta actaaagtta ctggcttggt 901 cttatttgca cagtttttgc gtcttgtttg cttcttgcat ctgattaact agaatatttc 961 tctttccccc ttttaatttg tgatgtcact tgaccccatt tatgtgtagg agcactacac 1021 cattggtttc caatactgca cacataagat acatacttgt gtgcagaaag tatcttcctc 1081 caggcttgta atacccttca catggaagat taatgaggga aatctttata ttctgtataa 1141 aaacaaaagc aaatttatat actaaaatca tttgtctaaa aatttaagtt gttttcaaat 1201 aaaaattaaa atgcatttct gatatgcaaa aaaaaaaaaa aa //