LOCUS       BC015179                1242 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens sorting nexin 3, mRNA (cDNA clone MGC:10153
            IMAGE:3905515), complete cds.
ACCESSION   BC015179
VERSION     BC015179.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1242)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 22 Row: i Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23111040.
FEATURES             Location/Qualifiers
     source          1..1242
                     /db_xref="H-InvDB:HIT000037037"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:10153 IMAGE:3905515"
                     /tissue_type="Pancreas, epithelioid carcinoma"
                     /clone_lib="NIH_MGC_70"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1242
                     /gene="SNX3"
                     /gene_synonym="MGC17570"
                     /gene_synonym="SDP3"
                     /gene_synonym="SNX3A"
                     /db_xref="GeneID:8724"
                     /db_xref="HGNC:HGNC:11174"
                     /db_xref="MIM:605930"
     CDS             104..592
                     /gene="SNX3"
                     /gene_synonym="MGC17570"
                     /gene_synonym="SDP3"
                     /gene_synonym="SNX3A"
                     /codon_start=1
                     /product="sorting nexin 3"
                     /protein_id="AAH15179.1"
                     /db_xref="GeneID:8724"
                     /db_xref="HGNC:HGNC:11174"
                     /db_xref="MIM:605930"
                     /translation="MAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRG
                     RFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLP
                     FRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPSKIR
                     HA"
BASE COUNT          368 a          260 c          273 g          341 t
ORIGIN      
        1 cgcgcgagcc ccgtgtcccc acggcgggca gcagcggcgg cggcggcggc tgaacgcgga
       61 gggggcggag ggagcccgcg gcggcggcag cagctacagc gaaatggcgg agaccgtggc
      121 tgacacccgg cggctgatca ccaagccgca gaacctgaat gacgcctacg gaccccccag
      181 caacttcctc gagatcgatg tgagcaaccc gcaaacggtg ggggtcggcc ggggccgctt
      241 caccacttac gaaatcaggg tcaagacaaa tcttcctatt ttcaagctga aagaatctac
      301 tgttagaaga agatacagtg actttgaatg gctgcgaagt gaattagaaa gagagagcaa
      361 ggtcgtagtt cccccgctcc ctgggaaagc gtttttgcgt cagcttcctt ttagaggaga
      421 tgatggaata tttgatgaca attttattga ggaaagaaaa caagggctgg agcagtttat
      481 aaacaaggtc gctggtcatc ctctggcaca gaacgaacgt tgtcttcaca tgtttttaca
      541 agatgaaata atagataaaa gctatactcc atctaaaata agacatgcct gaaatttggc
      601 aagaaggggc aaaaacgtga ctattaatga ttgataagca ccagtgaaga agttctaact
      661 tttagcatgc tgcacagaaa ctggtataac atgccttcag tatactaaca ctcatatgct
      721 cagttttgtt ttgttttggc agttgacaag aagttaattt gctttagtaa aaatccctca
      781 ttccagcctt tctatataaa tagctctttc ttgctgtttt aatgtggtgc acactatagc
      841 ctcacaaacc tgttattcca gtgtaatctg cagtgtcgta actaaagtta ctggcttggt
      901 cttatttgca cagtttttgc gtcttgtttg cttcttgcat ctgattaact agaatatttc
      961 tctttccccc ttttaatttg tgatgtcact tgaccccatt tatgtgtagg agcactacac
     1021 cattggtttc caatactgca cacataagat acatacttgt gtgcagaaag tatcttcctc
     1081 caggcttgta atacccttca catggaagat taatgaggga aatctttata ttctgtataa
     1141 aaacaaaagc aaatttatat actaaaatca tttgtctaaa aatttaagtt gttttcaaat
     1201 aaaaattaaa atgcatttct gatatgcaaa aaaaaaaaaa aa
//