LOCUS BC015120 926 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:3681098), partial cds. ACCESSION BC015120 VERSION BC015120.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 926) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 926) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 31 Row: a Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..926 /db_xref="H-InvDB:HIT000088560" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3681098" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..>926 /gene="ARID5B" /gene_synonym="MRF2" /gene_synonym="RP11-341A19.1" /db_xref="GeneID:84159" /db_xref="HGNC:HGNC:17362" /db_xref="MIM:608538" CDS 274..>926 /gene="ARID5B" /gene_synonym="MRF2" /gene_synonym="RP11-341A19.1" /codon_start=1 /product="ARID5B protein" /protein_id="AAH15120.1" /db_xref="GeneID:84159" /db_xref="HGNC:HGNC:17362" /db_xref="MIM:608538" /translation="MAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEA RSALTKPKNNHNCKKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYL GFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERSIL PYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKNKKKKKKKKK" BASE COUNT 331 a 201 c 217 g 177 t ORIGIN 1 ggggagagcc ctccctgcca gtctggcaac tccagcaaag tcctcaggct catcccacac 61 actcggtgct agtcactgct gtgtgtttac atgagtaatg gagctgccgg gggaggggag 121 ttgtaagcag agcgctgagc ctcgcagctc gcattcggag ggaagctgac atccacacca 181 agtcgagact tccagggatg tggccgggga gcagtcacat gctgtagctt tcatgagcac 241 aggcatcagt caggcagatg tttgtcgact ggaatggcgc caaatcttaa aggcagacca 301 cgcaaaaaga aaccatgccc acaaagaaga gattcattca gtggtgttaa ggattccaac 361 aacaattccg atggcaaagc cgttgccaag gtgaaatgtg aggccaggtc agccttgacc 421 aagccgaaga ataaccataa ctgtaaaaaa gtctcaaatg aagaaaaacc aaaggttgcc 481 attggtgaag agtgcagggc agatgaacaa gccttcttgg tggcacttta taaatacatg 541 aaagaaagga aaacgccgat agaacgaata ccctatttag gttttaaaca gattaacctt 601 tggactatgt ttcaagctgc tcaaaaactg ggaggatatg aaacaataac agcccgccgt 661 cagtggaaac atatttatga tgaattaggc ggtaatcctg ggagcaccag cgctgccact 721 tgtacccgca gacattatga aagatcaatc ctaccatatg aaagatttat taaaggagaa 781 gaagataagc ccctgcctcc aatcaaacct cggaaacagg agaacagttc acaggaaaat 841 gagaacaaaa caaaagtatc tggaaccaaa cgcatcaaac atgaaatacc taaaaacaaa 901 aaaaaaaaaa aaaaaaaaaa aaaaaa //