LOCUS BC015066 1234 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens core-binding factor, runt domain, alpha subunit 2;
translocated to, 2, mRNA (cDNA clone IMAGE:4294612), complete cds.
ACCESSION BC015066
VERSION BC015066.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1234)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1234)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: o Column: 5
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1234
/db_xref="H-InvDB:HIT000036993"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4294612"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1234
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/db_xref="GeneID:9139"
/db_xref="MIM:603672"
CDS 371..1162
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/codon_start=1
/product="CBFA2T2 protein"
/protein_id="AAH15066.1"
/db_xref="GeneID:9139"
/db_xref="MIM:603672"
/translation="MHGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGI
NHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGN
DISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQREL
LHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPESCIIHLKS
MGVASRHEYFSGTLQMPAHPVRNSTLENLWVDCSRSLRSTVLPFP"
misc_feature 626..898
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/note="TAFH; Region: TAF homology"
/db_xref="CDD:smart00549"
BASE COUNT 355 a 290 c 305 g 284 t
ORIGIN
1 gggggaaggg tagtggagag agaggaagca ggagggaggg agaaaaagag agagactgac
61 tgtatctggg gattctggca aggtgaagag ctggtctgtt tggcaggacc ttcccatctg
121 ggatccatct gtgtttccct ggaatgggac aggcagctct agtcagtgag aaatcgcaga
181 tgtgagagag ctgacacatg tccagctaat gaaaggagga ggaaggctgg tctccgattg
241 agctttgaag attaggagga gaaaaagagg agctttggaa tatctatttc aaataaattt
301 ggtgtattta agaatctgga ttgtttataa tttgggcatt tgggttggtc ctgagaaaag
361 ggtgccagcg atgcatggat cgcctgtgga agtgaagata cagtccagat cctcacctcc
421 caccatgcca cccctcccac caataaatcc tggaggaccg aggccagtgt ccttcactcc
481 tactgcatta agcaatggca tcaaccattc tcctcctacc ctgaatggtg ccccatcacc
541 gccacagaga ttcagcaatg gtcctgcctc ctccacatca tctgcactca caaatcagca
601 attgccagcc acttgtggtg ctcgacaact cagcaagttg aaacgctttc ttaccactct
661 gcaacagttt ggcaatgaca tctcccctga gattggggag aaggtgcgga ctcttgttct
721 tgcactggtg aactcaacag tgacaattga ggaattccac tgtaagctcc aagaagccac
781 aaactttccc cttcgtcctt ttgtgattcc atttctcaag gccaacctgc ccctgctgca
841 gcgggaactg ctgcactgcg ctcgggcggc caagcagacc ccatcccagt acctggctca
901 gcacgaacac cttctgctca acacaagcat tgcatcgcct gctgactcgt cagagttgct
961 catggaggtg cacggaaatg ggaagaggcc cagtccagag agctgcataa tacatctaaa
1021 atctatggga gtagcttcca gacatgagta tttttcggga actcttcaga tgcctgcaca
1081 cccggtaaga aactctactc tagagaattt atgggtcgac tgttccagaa gcctcaggag
1141 tacagttctg ccttttcctt gatgctgttt gtagaaagaa ttggaaaaaa aaaaaaagaa
1201 aagtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//