LOCUS BC015036 753 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens programmed cell death 4 (neoplastic transformation
inhibitor), mRNA (cDNA clone IMAGE:3921489), partial cds.
ACCESSION BC015036
VERSION BC015036.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 753)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 753)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015036.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21735595.
FEATURES Location/Qualifiers
source 1..753
/db_xref="H-InvDB:HIT000088542"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3921489"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>753
/gene="PDCD4"
/gene_synonym="H731"
/gene_synonym="MGC33046"
/gene_synonym="MGC33047"
/db_xref="GeneID:27250"
CDS 151..>753
/gene="PDCD4"
/gene_synonym="H731"
/gene_synonym="MGC33046"
/gene_synonym="MGC33047"
/codon_start=1
/product="PDCD4 protein"
/protein_id="AAH15036.1"
/db_xref="GeneID:27250"
/translation="MDVENEQILNVNPADPDNLSDSLFSGDEENAGTEEVKNEINGNW
ISASSINEARINAKAKRRLRKNSSRDSGRGDSVSDSGSDALRSGLTVPTSPKGRLLDR
RSRSGKGRGLPKKGGAGGKGVWGTPGQVYDVEEVDVKDPNYDDDQENCVYETVVLPLD
ERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKKKKK"
misc_feature 640..741
/gene="PDCD4"
/gene_synonym="H731"
/gene_synonym="MGC33046"
/gene_synonym="MGC33047"
/note="mi; Region: conserved alpha helical domain involved
in protein-protein interactions in eukaryotic translation
regulators"
/db_xref="CDD:LOAD_mi"
BASE COUNT 247 a 118 c 228 g 160 t
ORIGIN
1 cggacgcgtg ggcggcggca gagacagaag agcggggtcg gggccggctg accaggaacc
61 tgggcgagca gcggcggggg cccgagggat tctgaaggaa gatttccatt aggtaatttg
121 tttaatcagt gcaagcgaaa ttaagggaaa atggatgtag aaaatgagca gatactgaat
181 gtaaaccctg cagatcctga taacttaagt gactctctct tttccggtga tgaagaaaat
241 gctgggactg aggaagtaaa gaatgaaata aatggaaatt ggatttcagc atcctccatt
301 aacgaagcta gaattaatgc caaggcaaaa aggcgactaa ggaaaaactc atcccgggac
361 tctggcagag gcgattcggt cagcgacagt gggagtgacg cccttagaag tggattaact
421 gtgccaacca gtccaaaggg aaggttgctg gataggcgat ccagatctgg gaaaggaagg
481 ggactaccaa agaaaggtgg tgcaggaggc aaaggtgtct ggggtacacc tggacaggtg
541 tatgatgtgg aggaggtgga tgtgaaagat cctaactatg atgatgacca ggagaactgt
601 gtttatgaaa ctgtagtttt gcctttggat gaaagggcat ttgagaagac tttaacacca
661 atcatacagg aatattttga gcatggagat actaatgaag ttgcggaaat gttaagagat
721 ttaaatcttg gtgaaatgaa aaaaaaaaaa aaa
//