LOCUS BC015032 1291 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens ribosomal protein L3, transcript variant 1, mRNA (cDNA
clone IMAGE:3912046), complete cds.
ACCESSION BC015032
VERSION BC015032.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1291)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1291)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758893
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1291
/db_xref="H-InvDB:HIT000036973"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3912046"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1291
/gene="RPL3"
/gene_synonym="TARBP-B"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
CDS 10..1221
/gene="RPL3"
/gene_synonym="TARBP-B"
/codon_start=1
/product="ribosomal protein L3, isoform a"
/protein_id="AAH15032.1"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
/translation="MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLT
AFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTF
KTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVI
RVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMID
VIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH
RTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLK
GCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPL
KKDRIAKEEGA"
BASE COUNT 347 a 316 c 377 g 251 t
ORIGIN
1 gatggcgtga tgtctcacag aaagttctcc gctcccagac atgggtccct cggcttcctg
61 cctcggaagc gcagcagcag gcatcgtggg aaggtgaaga gcttccctaa ggatgacccg
121 tccaagccgg tccacctcac agccttcctg ggatacaagg ctggcatgac tcacatcgtg
181 cgggaagtcg acaggccggg atccaaggtg aacaagaagg aggtggtgga ggctgtgacc
241 attgtagaga caccacccat ggtggttgtg ggcattgtgg gctacgtgga aacccctcga
301 ggcctccgga ccttcaagac tgtctttgct gagcacatca gtgatgaatg caagaggcgt
361 ttctataaga attggcataa atctaagaag aaggccttta ccaagtactg caagaaatgg
421 caggatgagg atggcaagaa gcagctggag aaggacttca gcagcatgaa gaagtactgc
481 caagtcatcc gtgtcattgc ccacacccag atgcgcctgc ttcctctgcg ccagaagaag
541 gcccacctga tggagatcca ggtgaacgga ggcactgtgg ccgagaagct ggactgggcc
601 cgcgagaggc ttgagcagca ggtacctgtg aaccaagtgt ttgggcagga tgagatgatc
661 gacgtcatcg gggtgaccaa gggcaaaggc tacaaagggg tcaccagtcg ttggcacacc
721 aagaagctgc cccgcaagac ccaccgaggc ctgcgcaagg tggcctgtat tggggcatgg
781 catcctgctc gtgtagcctt ctctgtggca cgcgctgggc agaaaggcta ccatcaccgc
841 actgagatca acaagaagat ttataagatt ggccagggct accttatcaa ggacggcaag
901 ctgatcaaga acaatgcctc cactgactat gacctatctg acaagagcat caaccctctg
961 ggtggctttg tccactatgg tgaagtgacc aatgactttg tcatgctgaa aggctgtgtg
1021 gtgggaacca agaagcgggt gctcaccctc cgcaagtcct tgctggtgca gacgaagcgg
1081 cgggctctgg agaagattga ccttaagttc attgacacca cctccaagtt tggccatggc
1141 cgcttccaga ccatggagga gaagaaagca ttcatgggac cactgaagaa agaccgaatt
1201 gcaaaggaag aaggagctta atgccaggaa cagattttgc agttggtggg gtctcaataa
1261 aagttatttt ccactgaaaa aaaaaaaaaa a
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