LOCUS       BC015024                1924 bp    mRNA    linear   HUM 18-AUG-2006
DEFINITION  Homo sapiens alkB, alkylation repair homolog 1 (E. coli), mRNA
            (cDNA clone IMAGE:3910971), partial cds.
ACCESSION   BC015024
VERSION     BC015024.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1924)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 15 Row: h Column: 5
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5174384.
FEATURES             Location/Qualifiers
     source          1..1924
                     /db_xref="H-InvDB:HIT000088540"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3910971"
                     /tissue_type="Uterus, leiomyosarcoma"
                     /clone_lib="NIH_MGC_71"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..1924
                     /gene="ALKBH1"
                     /gene_synonym="ABH"
                     /gene_synonym="alkB"
                     /gene_synonym="hABH"
                     /db_xref="GeneID:8846"
                     /db_xref="HGNC:HGNC:17911"
                     /db_xref="MIM:605345"
     CDS             <1..1144
                     /gene="ALKBH1"
                     /gene_synonym="ABH"
                     /gene_synonym="alkB"
                     /gene_synonym="hABH"
                     /codon_start=2
                     /product="ALKBH1 protein"
                     /protein_id="AAH15024.1"
                     /db_xref="GeneID:8846"
                     /db_xref="HGNC:HGNC:17911"
                     /db_xref="MIM:605345"
                     /translation="SVATLATEPGEDAFRKLFRFYRQSRPGTADLEGVIDFSAAHAAR
                     GKGPGAQKVIKSQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYPGFIFIPNPFLPGYQ
                     WHWVKQCLKLYSQKPNVCNLDKHMSKEETQDLWEQSKEFLRYKEATKRRPRSLLEKLR
                     WVTVGYHYNWDSKKYSADHYTPFPSDLGFLSEQVAAACGFEDFRAEAGILNYYRLDST
                     LGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLL
                     NHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSLEDWQVCASYLKTARVNMTV
                     RQVLATDQNFPLEPIEDEKRDISTEGFCHLDDQNSEVKRARINPDS"
BASE COUNT          521 a          468 c          427 g          508 t
ORIGIN      
        1 ctctgtggcg actctggcga ctgagcccgg ggaggacgcc tttcggaaac ttttccgctt
       61 ctaccgtcag agccggcccg ggaccgcaga cctggaaggg gtcatcgact tctcggcggc
      121 ccacgcagcc cgtggcaagg gtcctggtgc ccaaaaggtg atcaaatctc agctaaatgt
      181 gtcttctgtc agtgagcaga atgcatatag agcaggtctt cagcccgtca gcaagtggca
      241 agcctatgga ctcaaaggct atcctgggtt tatttttatc ccaaacccct tcctcccagg
      301 ttaccagtgg cactgggtga aacagtgcct taagttatat tcccagaaac ctaatgtatg
      361 taacctggac aaacacatgt ctaaagaaga gacccaagat ctgtgggaac agagcaaaga
      421 gttcctgagg tataaagaag cgactaaacg gagaccccga agtttactgg agaaactgcg
      481 ttgggtgacc gtaggctacc attataactg ggacagtaag aaatactcag cagatcatta
      541 cacacctttc ccttctgacc tgggtttcct ctcagagcaa gtagccgctg cctgtggatt
      601 tgaggatttc cgagctgaag cagggatcct gaattactac cgcctggact ccacactggg
      661 aatccacgta gacagatctg agctagatca ctccaaaccc ttgctgtcat tcagctttgg
      721 acagtccgcc atctttctcc tgggtggtct tcaaagggat gaggccccca cggccatgtt
      781 tatgcacagt ggtgacatca tgataatgtc gggtttcagc cgcctcttga accacgcagt
      841 ccctcgtgtc cttccaaatc cagaagggga aggcctgcct cactgcctag aggcacctct
      901 ccctgctgtc ctcccgagag attcaatggt agagccttgt tctttggagg actggcaggt
      961 gtgtgccagt tacttgaaga ccgctcgtgt taacatgact gtccgacagg tcctggccac
     1021 agaccagaat ttccctctag aacccatcga ggatgaaaaa agagacatca gtacagaagg
     1081 tttctgccat ctggatgacc agaatagcga agtaaaacgg gccaggataa accctgacag
     1141 ctgagacttg gagatcccat cctttttact caggcacctg cttaccgtaa atgatcatgt
     1201 tattgtgtat tgccgtggac ttcagcaccc agacaagcca aaaacagaga cagggaagaa
     1261 ctcattgttg atcacactgt tgccttggaa cccacgcaga agtaaactca gccactttgc
     1321 tcagagaagt gtttgacatg gtctgttcct agttacatgt tggctgtaat gtatgttgag
     1381 aagtcagtcc aaggaggtat gttcttccac aacagccttc tcagcctctg ctatttcctt
     1441 tgaggaaggt agaagtgagt ttccatgttt gcagagtatt taaatacctc agattttatt
     1501 aatgagaaat acagtacccc tccctccact ccatctggta atttatggta aaattgtggt
     1561 tctgtgaacc agctattagt ctcatcttct taactccctc aggcatcatc aaattctttg
     1621 atcttctctt ccacctctct ggctctcatg gaagaatcct ttacacatga aaacaatgga
     1681 actggaaaat cttgtctttt agaaaagaaa ttaatcacaa ctatctctct tgcctaaaag
     1741 ataaatatag gtaaacccaa ggaaagggga atttagtttc tctacatgtc atttcggtct
     1801 ccaaactccc tgttggcttt ttaatgcaat tttaattgtt ggaataaaaa agtcccaagg
     1861 gtgttttgtt actgttttct ccatgaataa actcacttga ttttaaatta aaaaaaaaaa
     1921 aaaa
//