LOCUS BC015020 2336 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens nuclear RNA export factor 2, mRNA (cDNA clone MGC:8883
IMAGE:3921074), complete cds.
ACCESSION BC015020
VERSION BC015020.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2336)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2336)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13430853.
FEATURES Location/Qualifiers
source 1..2336
/db_xref="H-InvDB:HIT000036965_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8883 IMAGE:3921074"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2336
/gene="NXF2"
/gene_synonym="FLJ20416"
/gene_synonym="TAPL-2"
/db_xref="GeneID:56001"
/db_xref="HGNC:HGNC:8072"
/db_xref="MIM:300315"
CDS 235..2115
/gene="NXF2"
/gene_synonym="FLJ20416"
/gene_synonym="TAPL-2"
/codon_start=1
/product="nuclear RNA export factor 2"
/protein_id="AAH15020.1"
/db_xref="GeneID:56001"
/db_xref="HGNC:HGNC:8072"
/db_xref="MIM:300315"
/translation="MCSTLKKCGTYRTEVAECHDHGSTFQGRKKGGSSFRDNFDKRSC
HYEHGGYERPPSHCQENDGSVEMRDVHKDQQLRHTPYSIRCERRMKWHSEDEIRITTW
RNRKPPERKMSQNTQDGYTRNWFKVTIPYGIKYDKAWLMNSIQSHCSDRFTPVDFHYV
RNRACFFVQDASAASALKDVSYKIYDDENQKICIFVNHSTAPYSVKNKLKPGQMEMLK
LTMNKRYNVSQQALDLQNLRFDPDLMGRDIDIILNRRNCMAATLKIIERNFPELLSLN
LCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCS
TFSDQSAYVSAIRDCFPKLLRLDGRELSAPVIVDIDSSETMKPCKENFTGSETLKHLV
LQFLQQYYSIYDSGDRQGLLGAYHDEACFSLAIPFDPKDSAPSSLCKYFEDSRNMKTL
KDPYLKGELLRRTKRDIVDSLSALPKTQHDLSSILVDVWCQTERMLCFSVNGVFKEVE
GQSQGSVLAFTRTFIATPGSSSSLCIVNDELFVRDASPQETQSAFSIPVSTLSSSSEP
SLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWNYTRAGQAFTMLQTEGKIPAEAFKQ
IS"
BASE COUNT 631 a 578 c 557 g 570 t
ORIGIN
1 ggcaagattc tgaggggaag tgtagctccc aggttggttc caagtcttct tccaattagg
61 atcttatcca ggacgcttca ttgcatttgg tcttcatttc tccttagtct cctccaggct
121 gacatttcct caatctttat tggtcttcca cagccctgac acttttggag ataccagtca
181 gcatttccaa gttcgttctg tgagactgta gtgtcaggac aaagcaacaa caaaatgtgc
241 tctactctaa agaagtgtgg gacatacaga actgaagttg cagaatgcca tgaccatggt
301 agcacttttc aaggaagaaa gaaaggtggg agttctttcc gggataattt tgacaagagg
361 agctgtcatt atgaacatgg tgggtatgag cgcccgcctt cacactgcca ggagaatgat
421 ggaagcgtgg agatgaggga tgtccacaag gaccaacaac taagacacac tccttatagc
481 atccgatgcg aaagaagaat gaaatggcat agtgaagacg aaatccgtat taccacgtgg
541 agaaatagaa aacctccgga gagaaaaatg agtcagaaca cacaggatgg atacacaagg
601 aactggttta aggtcacaat tccttacggg ataaagtatg acaaggcatg gctaatgaat
661 tcaatccaga gccattgcag tgaccgcttc actccggttg atttccacta cgtccgaaat
721 cgggcatgct tctttgtcca ggatgctagc gctgcctccg cattgaagga tgtcagttat
781 aagatttatg atgatgagaa ccaaaagata tgtatatttg tcaatcattc tactgcgccc
841 tactctgtga agaataagtt gaagccaggc caaatggaga tgctaaagct gaccatgaac
901 aaacggtaca atgtctccca gcaagctctt gatctccaga atctccgctt tgacccagac
961 ttgatgggcc gtgacattga tataatcctg aatcgaagaa actgcatggc tgccaccctg
1021 aagatcattg aaagaaattt ccctgagctg ttgtctttga acttgtgcaa caacaagctg
1081 taccagctgg atggcctttc tgacattaca gagaaggctc ccaaagtcaa gaccctgaat
1141 ctctccaaaa ataagctgga gtcggcgtgg gagttgggca aggtgaaagg gctgaagctc
1201 gaagagctat ggctagaagg gaacccgttg tgcagcacct tctcggacca gtccgcctat
1261 gtaagtgcca tccgggattg tttccccaag ttgttacgcc tggacggccg agagttatcc
1321 gcaccagtga ttgttgacat tgacagctct gagacaatga aaccctgcaa ggaaaacttt
1381 actggatctg agaccctaaa gcatttagtc ctgcaattcc tgcagcagta ttactcgatc
1441 tatgactctg gagatcgaca gggtctcctc ggtgcttacc acgatgaggc ctgcttctcc
1501 ttggctattc ccttcgaccc caaggactca gccccgagca gcttgtgcaa gtactttgag
1561 gatagcagga atatgaaaac actcaaggac ccctacctga agggggaact gctgaggcgc
1621 acaaaacgtg acattgtgga ctccctcagt gcgttgccca aaactcagca tgacctcagc
1681 tccatcctgg tggacgtgtg gtgccagacg gaaaggatgc tctgcttttc tgtcaatggg
1741 gttttcaagg aagtggaagg acagtctcag ggttctgttc tcgccttcac ccggaccttc
1801 attgctaccc ctggcagcag ttccagtctg tgcatcgtga atgacgagct gtttgtgagg
1861 gatgccagcc cccaagagac tcagagtgcc ttctccatcc cagtgtccac actctcctcc
1921 agctctgagc cctccctctc ccaggagcag caggaaatgg tgcaggcttt ctctgcccag
1981 tctgggatga aactggagtg gtctcagaag tgccttcagg acaatgagtg gaactacact
2041 agagctggcc aggccttcac tatgctccag accgagggca agatccccgc agaggccttc
2101 aagcaaatct cctaaaagga gccctccgat gtcttctttg tcttcgttca catcctcttt
2161 gtttcctctt ttcaccagcc taaggcctgg ctgaccagga agccaacgtt aacttgcagg
2221 ccacgtgaca taaccaccca aagagccagt tgctctgtgt attcgcccca ctcatgatca
2281 ccattttatt ttcataataa agagtgacgt tacacgttgt aaaaaaaaaa aaaaaa
//