LOCUS BC014980 2044 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein K, mRNA (cDNA
clone MGC:23171 IMAGE:4906241), complete cds.
ACCESSION BC014980
VERSION BC014980.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2044)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2044)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: o Column: 22.
FEATURES Location/Qualifiers
source 1..2044
/db_xref="H-InvDB:HIT000036940"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23171 IMAGE:4906241"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2044
/gene="HNRPK"
/gene_synonym="CSBP"
/gene_synonym="HNRNPK"
/gene_synonym="TUNP"
/db_xref="GeneID:3190"
/db_xref="HGNC:HGNC:5044"
/db_xref="MIM:600712"
CDS 194..1585
/gene="HNRPK"
/gene_synonym="CSBP"
/gene_synonym="HNRNPK"
/gene_synonym="TUNP"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein K"
/protein_id="AAH14980.1"
/db_xref="GeneID:3190"
/db_xref="HGNC:HGNC:5044"
/db_xref="MIM:600712"
/translation="METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVE
LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILK
KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGII
GVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPI
KGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS
RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYD
GMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL
LQNSVKQYSGKFF"
BASE COUNT 577 a 420 c 503 g 544 t
ORIGIN
1 cagcattgca gacgccatta tcctctgttt ctctgctgca ccgacctcga cgtcttgcct
61 gtgtcccact tgttcgcggc ctataggcta ctgcagcact ggggtgtcag ttgttggtcc
121 gacccagaac gcttcagttg tgctctgcaa ggatatataa taactgattg gtgtgcccgt
181 ttaataaaag aatatggaaa ctgaacagcc agaagaaacc ttccctaaca ctgaaaccaa
241 tggtgaattt ggtaaacgcc ctgcagaaga tatggaagag gaacaagcat ttaaaagatc
301 tagaaacact gatgagatgg ttgaattacg cattctgctt cagagcaaga atgctggggc
361 agtgattgga aaaggaggca agaatattaa ggctctccgt acagactaca atgccagtgt
421 ttcagtccca gacagcagtg gccccgagcg catattgagt atcagtgctg atattgaaac
481 aattggagaa attctgaaga aaatcatccc taccttggaa gagggcctgc agttgccatc
541 acccactgca accagccagc tcccgctcga atctgatgct gtggaatgct taaattacca
601 acactataaa ggaagtgact ttgactgcga gttgaggctg ttgattcatc agagtctagc
661 aggaggaatt attggggtca aaggtgctaa aatcaaagaa cttcgagaga acactcaaac
721 caccatcaag cttttccagg aatgctgtcc tcattccact gacagagttg ttcttattgg
781 aggaaaaccc gatagggttg tagagtgcat aaagatcatc cttgatctta tatctgagtc
841 tcccatcaaa ggacgtgcac agccttatga tcccaatttt tacgatgaaa cctatgatta
901 tggtggtttt acaatgatgt ttgatgaccg tcgcggacgc ccagtgggat ttcccatgcg
961 gggaagaggt ggttttgaca gaatgcctcc tggtcggggt gggcgtccca tgcctccatc
1021 tagaagagat tatgatgata tgagccctcg tcgaggacca cctccccctc ctcccggacg
1081 aggcggccgg ggtggtagca gagctcggaa tcttcctctt cctccaccac caccacctag
1141 agggggagac ctcatggcct atgacagaag agggagacct ggagaccgtt acgacggcat
1201 ggttggtttc agtgctgatg aaacttggga ctctgcaata gatacatgga gcccatcaga
1261 atggcagatg gcttatgaac cacagggtgg ctccggatat gattattcct atgcaggggg
1321 tcgtggctca tatggtgatc ttggtggacc tattattact acacaagtaa ctattcccaa
1381 agatttggct ggatctatta ttggcaaagg tggtcagcgg attaaacaaa tccgtcatga
1441 gtcgggagct tcgatcaaaa ttgatgagcc tttagaagga tccgaagatc ggatcattac
1501 cattacagga acacaggacc agatacagaa tgcacagtat ttgctgcaga acagtgtgaa
1561 gcagtattct ggaaagtttt tctaagacta gtgaagaact gaaggagtcc tgcatctttt
1621 tttttttatc tgcttctgtt taaaaagcca acattcctct gcttcatagg tgttctgcat
1681 ttgaggtgta gtgaaatctt tgctgttcac cagatgtaat gttttagttc cttacaaaca
1741 gggttggggg ggggaagggc gtgcaaaaac taacattgaa attttgaaac agcagcagag
1801 tgagtggatt ttatttttcg ttattgttgg tggtttaaaa aattcccccc atgtaattat
1861 tgtgaacacc ttgctttgtg gtcactgtaa catttggggg gtgggacagg gaggaaaagt
1921 aacaatagtc cacatgtccc tggcatctgt tcagagcagt gtgcagaatg taatgctctt
1981 ttgtaagaaa cgttttatga tttttaaaat aaatttagtg aacctaaaaa aaaaaaaaaa
2041 aaaa
//