LOCUS BC014967 1578 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens chromobox homolog 4 (Pc class homolog, Drosophila), mRNA (cDNA clone MGC:23084 IMAGE:4856728), complete cds. ACCESSION BC014967 VERSION BC014967.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1578) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1578) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: d Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4502602. FEATURES Location/Qualifiers source 1..1578 /db_xref="H-InvDB:HIT000036929" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23084 IMAGE:4856728" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1578 /gene="CBX4" /gene_synonym="hPC2" /gene_synonym="PC2" /db_xref="GeneID:8535" /db_xref="MIM:603079" CDS 20..892 /gene="CBX4" /gene_synonym="hPC2" /gene_synonym="PC2" /codon_start=1 /product="CBX4 protein" /protein_id="AAH14967.1" /db_xref="GeneID:8535" /db_xref="MIM:603079" /translation="MELPAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEP EENILDPRLLIAFQNRERQEQLMGYRKRGPKPKPLVVQVPTFARRSNVLTGLQDSSTD NRAKLDLGAQGKGQGHQYELNSKKHHHHAVGLNLSHVRKRCLSETHGEREPCKKRLTA RSISTPTCLGGSPAAERPADLPPAAALPQPEVILLDSDLDEPIDLRCVKTRSEAGEPP SSLQVKPETPASAAVAVAAAAAPTTTAEKPPAEAQDEPAESLSEFKPFFGNIIITDVT ANCLTVTFKEYVTV" misc_feature 41..163 /gene="CBX4" /gene_synonym="hPC2" /gene_synonym="PC2" /note="chromo; Region: 'chromo' (CHRromatin Organization MOdifier) domain" /db_xref="CDD:pfam00385" BASE COUNT 337 a 482 c 451 g 308 t ORIGIN 1 ggcgcgctcc ggctcggcca tggagctgcc agctgttggc gagcacgtct tcgcggtgga 61 gagcatcgag aagaagcgga tccgcaaggg cagagtggag tatctggtga aatggagagg 121 ctggtcgccc aaatataaca cgtgggaacc ggaggagaac atcctggacc ccaggctgct 181 gatcgccttc cagaacaggg aacggcagga gcagctgatg ggatatcgga agagagggcc 241 gaagcccaaa ccgctagtgg tgcaggtgcc tacctttgcc cgtcgttcca atgtcctgac 301 cggcctccag gactcctcca ctgacaaccg tgccaagctg gatttgggcg cgcaggggaa 361 gggccagggg catcagtacg agctcaacag caagaagcac caccaccacg ccgtcggcct 421 gaatctctcc cacgtgcgca agcgctgcct ctccgagacc cacggcgagc gcgagccctg 481 caagaagcgg ctgactgcgc gcagcatcag cacccccacc tgcctggggg gcagcccagc 541 cgctgagcgc ccggccgacc tgccaccagc cgccgccctc ccgcagcccg aggtcatcct 601 gctagactca gacctggatg aacccataga cttgcgctgc gtcaagacgc gcagcgaggc 661 cggggagccg cccagctccc tccaggtgaa gcccgagaca ccggcgtcgg cggcggtggc 721 ggtggcggcg gcagcggcac ccaccacgac ggcggagaag cctccagccg aggcccagga 781 cgaacctgca gagtcgctga gcgagttcaa gcccttcttt gggaatataa ttatcaccga 841 cgtcaccgcg aactgcctca ccgttacttt caaggagtac gtgacggtgt agccggaggg 901 cgtcggaagg ggaagcgcca ttcccgcggg ggggcgggga gctgagcacc tggggcctcg 961 gggcgggctc ccctctcgcc aacccgccaa ccgcgagaga cccaggctgg cccccagggt 1021 gaggacgccc ggagcggagg taaccatgtt ccccctgcgg cggctgtcag acctgggcgg 1081 aggccccttc cacgcggtgc cggcggggct cgccctctcc tgcccttccc cgctggagat 1141 ggacccccgg aacggacagg gcagctctgc gcccggcctc agagttctag tattatattt 1201 taaccgtgct aacttgtcaa gtgctgactc tactcccgtt tgtacgtggt gttattattg 1261 aaatgtattg tttgagctca aaaggcccga ccacccccct tcgggctgct atatatatat 1321 ttatttgtag gtatttatat attgaaatat aaaaacctag atttatggag tttcctctag 1381 atcatgttat attctatatc agacaaacta ttttcttttg acctttcttc ccctccatcc 1441 agtatttcgg ttgatttcat tttctcccct ctcttcccct tccacgaact gcaataccag 1501 taaccttggt atatattttt tgatactgta cacatggatg tcttgtttct atgtgcaaaa 1561 aaaaaaaaaa aaaaaaaa //