LOCUS BC014952 2249 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TH1-like (Drosophila), mRNA (cDNA clone MGC:22971
IMAGE:4860894), complete cds.
ACCESSION BC014952
VERSION BC014952.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2249)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2249)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39812491.
FEATURES Location/Qualifiers
source 1..2249
/db_xref="H-InvDB:HIT000036917"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22971 IMAGE:4860894"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2249
/gene="TH1L"
/gene_synonym="HSPC130"
/gene_synonym="NELF-C"
/gene_synonym="NELF-D"
/gene_synonym="TH1"
/db_xref="GeneID:51497"
/db_xref="HGNC:HGNC:15934"
/db_xref="MIM:605297"
CDS 12..1784
/gene="TH1L"
/gene_synonym="HSPC130"
/gene_synonym="NELF-C"
/gene_synonym="NELF-D"
/gene_synonym="TH1"
/codon_start=1
/product="TH1-like (Drosophila)"
/protein_id="AAH14952.1"
/db_xref="GeneID:51497"
/db_xref="HGNC:HGNC:15934"
/db_xref="MIM:605297"
/translation="MAGAVPGAIMDEDYYGSAAEWGDEADGGQQEDDSGEGEDDAEVQ
QECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLI
QTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFY
KLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEE
NLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRIAQEVQRFAQEKGHDA
SQITLALGTAASYPRACQALGAMLSKGALNPADITVLFKMFTSMDPPPVELIRVPAFL
DLFMQSLFKPGARINQDHKHKYIHILAYAASVVETWKKNKRVSINKDELKSTSKAVET
VHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPV
HLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY
VLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTI
KTEGEHDPVTEFIAHCKSNFIMVN"
BASE COUNT 585 a 564 c 584 g 516 t
ORIGIN
1 cgcgggaggg catggcgggg gccgtgccgg gcgccatcat ggacgaggac tactacggga
61 gcgcggccga gtggggcgac gaggctgacg gcggccagca ggaggatgat tctggagaag
121 gagaggatga tgcggaggtt cagcaagaat gcctgcataa attttccacc cgggattata
181 tcatggaacc ctccatcttc aacactctga agaggtattt tcaggcagga gggtctccag
241 agaatgttat ccagctctta tctgaaaact acaccgctgt ggcccagact gtgaacctgc
301 tggccgagtg gctcattcag acaggtgttg agccagtgca ggttcaggaa actgtggaaa
361 atcacttgaa gagtttgctg atcaaacatt ttgacccccg caaagcagat tctattttta
421 ctgaagaagg agagacccca gcgtggctgg aacagatgat tgcacatacc acgtggcggg
481 acctttttta taaactggct gaagcccatc cagactgttt gatgctgaac ttcaccgtta
541 agcttatttc tgacgcaggg taccaggggg agatcaccag tgtgtccaca gcatgccagc
601 agctagaagt gttctcgaga gtgctccgga cctctctagc tacaatttta gatggaggag
661 aagaaaacct tgaaaaaaat ctccctgagt ttgctaagat ggtgtgccac ggggagcaca
721 cgtacctgtt tgcccaggcc atgatgtccg tgctggccca ggaggagcag gggggctccg
781 ctgtgcgcag gatcgcccag gaagtgcagc gctttgccca ggagaaaggt catgacgcca
841 gtcagatcac actagccttg ggcacagctg cctcctaccc cagggcctgc caggctctcg
901 gggccatgct gtccaaagga gccctgaacc ctgctgacat caccgtcctg ttcaagatgt
961 tcacaagcat ggaccctcct ccggttgaac ttatccgcgt tccagccttc ctggacctgt
1021 tcatgcagtc actctttaaa ccaggggctc ggatcaacca ggaccacaag cacaaataca
1081 tccacatctt ggcgtacgca gcaagcgtgg ttgagacctg gaagaagaac aagcgagtga
1141 gcatcaataa agatgagctg aagtcaacgt caaaagctgt cgaaaccgtt cacaatttgt
1201 gttgcaacga gaacaaaggg gcctctgaac tagtggcaga attgagcaca ctttatcagt
1261 gtattaggtt tccagtggta gcaatgggtg tgctgaagtg ggtggattgg actgtatcag
1321 aaccaaggta ctttcagctg cagactgacc atacccctgt ccacctggcg ttgctggatg
1381 agatcagcac ctgccaccag ctcctgcacc cccaggtcct gcagctgctt gttaagcttt
1441 ttgagactga gcactcccag ctggacgtga tggagcagct tgagttgaag aagacactgc
1501 tggacaggat ggttcacctg ctgagtcgag gttatgtact tcctgttgtc agttacatcc
1561 gaaagtgtct ggagaagctg gacactgaca tttcactcat tcgctatttt gtcactgagg
1621 tgctggacgt cattgctcct ccttatacct ctgacttcgt gcaacttttc ctccccatcc
1681 tggagaatga cagcatcgca ggtaccatca aaacggaagg cgagcatgac cctgtgacgg
1741 agtttatagc tcactgcaaa tctaacttca tcatggtgaa ctaatttaga gcatcctcca
1801 gagctgaagc agaacattcc agaacccgtt gtggaaaaac cctttcaaga agctgtttta
1861 agaggctcgg gcagcgtctt gaaaatgggc accgctggga ggaggtggat gacttcttta
1921 caaaggaaaa tggtagcagc ttcagtgaga aactgccctt acaaacagtc ccttctctgc
1981 tgtcaatcca atactgctcc caaatcctgt tttcagtgtt catttccctc aaggcaggcg
2041 ctgggctccc acgacccctc aggacagatc tggccgtcag ccgcgggccg ctgggaactc
2101 cactcgggga actcctttcc aagctgacct cagttttctc acaagaaccc agttagctga
2161 tgttttattg taattgtctt aatttgctaa gaacaagtaa taagtaaatt tttaaaaagc
2221 caaaaaaaaa aaaaaaaaaa aaaaaaaaa
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