LOCUS BC014949 2584 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens DEXH (Asp-Glu-X-His) box polypeptide 58, mRNA (cDNA
clone MGC:22961 IMAGE:4865798), complete cds.
ACCESSION BC014949
VERSION BC014949.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2584)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2584)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13129141.
FEATURES Location/Qualifiers
source 1..2584
/db_xref="H-InvDB:HIT000036914"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22961 IMAGE:4865798"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2584
/gene="DHX58"
/gene_synonym="D11LGP2"
/gene_synonym="D11lgp2e"
/gene_synonym="LGP2"
/db_xref="GeneID:79132"
/db_xref="HGNC:HGNC:29517"
CDS 161..2197
/gene="DHX58"
/gene_synonym="D11LGP2"
/gene_synonym="D11lgp2e"
/gene_synonym="LGP2"
/codon_start=1
/product="DEXH (Asp-Glu-X-His) box polypeptide 58"
/protein_id="AAH14949.1"
/db_xref="GeneID:79132"
/db_xref="HGNC:HGNC:29517"
/translation="MELRSYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLET
VDGAKVVVLVNRVHLVTQHGEEFRRMLDGRWTVTTLSGDMGPRAGFGHLARCHDLLIC
TAELLQMALTSPEEEEHVELTVFSLIVVDECHHTHKDTVYNVIMSQYLELKLQRAQPL
PQVLGLTASPGTGGASKLDGAINHVLQLCANLDTWCIMSPQNCCPQLQEHSQQPCKQY
NLCHRRSQDPFGDLLKKLMDQIHDHLEMPELSRKFGTQMYEQQVVKLSEAAALAGLQE
QRVYALHLRRYNDALLIHDTVRAVDALAALQDFYHREHVTKTQILCAERRLLALFDDR
KNELAHLATHGPENPKLEMLEKILQRQFSSSNSPRGIIFTRTRQSAHSLLLWLQQQQG
LQTVDIRAQLLIGAGNSSQSTHMTQRDQQEVIQKFQDGTLNLLVATSVAEEGLDIPHC
NVVVRYGLLTNEISMVQARGRARADQSVYAFVATEGSRELKRELINEALETLMEQAVA
AVQKMDQAEYQAKIRDLQQAALTKRAAQAAQRENQRQQFPVEHVQLLCINCMVAVGHG
SDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGVISCRNCGEVWGLQMI
YKSVKLPVLKVRSMLLETPQGRIQAKKWSRVPFSVPDFDFLQHCAENLSDLSLD"
BASE COUNT 614 a 720 c 769 g 481 t
ORIGIN
1 aagcagggcc gccttgggca ggcctacgtg gtggtgcagg cgagacccag gctgggcaag
61 gcgcagtttc agtttccatc ttgggtctct gagctgagca gagtggcacc aggctgagtt
121 aagtgggact gccctgggca gacctaccta ctagagcaga atggagcttc ggtcctacca
181 atgggaggtg atcatgcctg ccctggaggg caagaatatc atcatctggc tgcccacggg
241 tgccgggaag acccgggcgg ctgcttatgt ggccaagcgg cacctagaga ctgtggatgg
301 agccaaggtg gttgtattgg tcaacagggt gcacctggtg acccagcatg gtgaagagtt
361 caggcgcatg ctggatggac gctggaccgt gacaaccctg agtggggaca tgggaccacg
421 tgctggcttt ggccacctgg cccggtgcca tgacctgctc atctgcacag cagagcttct
481 gcagatggca ctgaccagcc ccgaggagga ggagcacgtg gagctcactg tcttctccct
541 gatcgtggtg gatgagtgcc accacacgca caaggacacc gtctacaacg tcatcatgag
601 ccagtaccta gaacttaaac tccagagggc acagccgcta ccccaggtgc tgggtctcac
661 agcctcccca ggcactggcg gggcctccaa actcgatggg gccatcaacc acgtcctgca
721 gctctgtgcc aacttggaca cgtggtgcat catgtcaccc cagaactgct gcccccagct
781 gcaggagcac agccaacagc cttgcaaaca gtacaacctc tgccacaggc gcagccagga
841 tccgtttggg gacttgctga agaagctcat ggaccaaatc catgaccacc tggagatgcc
901 tgagttgagc cggaaatttg ggacgcaaat gtatgagcag caggtggtga agctgagtga
961 ggctgcggct ttggctgggc ttcaggagca acgggtgtat gcgcttcacc tgaggcgcta
1021 caatgacgcg ctgctcatcc atgacaccgt ccgcgccgtg gatgccttgg ctgcgctgca
1081 ggatttctat cacagggagc acgtcactaa aacccagatc ctgtgtgccg agcgccggct
1141 gctggccctg ttcgatgacc gcaagaatga gctggcccac ttggcaactc atggcccaga
1201 gaatccaaaa ctggagatgc tggaaaagat cctgcaaagg cagttcagta gctctaacag
1261 ccctcggggt atcatcttca cccgcacccg ccaaagcgca cactccctcc tgctctggct
1321 ccagcagcag cagggcctgc agactgtgga catccgggcc cagctactga ttggggctgg
1381 gaacagcagc cagagcaccc acatgaccca gagggaccag caagaagtga tccagaagtt
1441 ccaagatgga accctgaacc ttctggtggc cacgagtgtg gcggaggagg ggctggacat
1501 cccacattgc aatgtggtgg tgcgttatgg gctcttgacc aatgaaatct ccatggtcca
1561 ggccaggggc cgtgcccggg ccgatcagag tgtatacgcg tttgtagcaa ctgaaggtag
1621 ccgggagctg aagcgggagc tgatcaacga ggcgctggag acgctgatgg agcaggcagt
1681 ggctgctgtg cagaaaatgg accaggccga gtaccaggcc aagatccggg atctgcagca
1741 ggcagccttg accaagcggg cggcccaggc agcccagcgg gagaaccagc ggcagcagtt
1801 cccagtggag cacgtgcagc tactctgcat caactgcatg gtggctgtgg gccatggcag
1861 cgacctgcgg aaggtggagg gcacccacca tgtcaatgtg aaccccaact tctcgaacta
1921 ctataatgtc tccagggatc ctgtggtcat caacaaagtc ttcaaggact ggaagcctgg
1981 gggtgtcatc agctgcagga actgtgggga ggtctggggt ctgcagatga tctacaagtc
2041 agtgaagctg ccagtgctca aagtccgcag catgctgctg gagacccctc aggggcggat
2101 ccaggccaaa aagtggtccc gcgtgccctt ctccgtgcct gactttgact tcctgcagca
2161 ttgtgccgag aacttgtcgg acctctccct ggactgacca cctcattgct gcagtgcccg
2221 gtttgggctg tagggggcgg gagagtctgc agcagactcc aggcccctcc ttcctgaatc
2281 atcagctgtg ggcatcaggc ccaccagcca cacaggagtc ctgggcaccc tggcttaggc
2341 tcccgcaatg ggaaaacaac cggagggcca gagcttagtc cagacctacc ttgtacgcac
2401 atagacattt tcatatgcac tggatggagt tagggaaact gaggcaaaag aatttgccat
2461 actgtactca gaatcacgac attccttccc taccaaggcc acttctattt tttgaggctc
2521 ctcataaaaa taaatgaaaa aatgggataa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaa
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