LOCUS BC014929 652 bp mRNA linear HTC 19-NOV-2003 DEFINITION Homo sapiens SRY (sex determining region Y)-box 5, mRNA (cDNA clone IMAGE:3919439), with apparent retained intron. ACCESSION BC014929 VERSION BC014929.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 652) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 652) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: k Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23308712 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..652 /db_xref="H-InvDB:HIT000088511" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3919439" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 197 a 127 c 168 g 160 t ORIGIN 1 gagcgtgcgt gagtgagtgt gtgtgtgtgt gtgtgtgtgt gcatgcgtgt gtgaagaatg 61 cacactatct cctgttggtt cagttggaga cgatcatagg tggctgctgt gacaaaggga 121 aattgtgctt ttccagcatg cttactgacc ctgatttacc tcaggagttt gaaaggatgt 181 cttccaagcg accagcctct ccgtatgggg aagcagatgg agaggtagcc atggtgacaa 241 gcagacagaa agtggaagaa gaggagagtg acgggctccc agcctttcac cttcccttgc 301 atgaagttga tggcaataaa gttatgtctt catttgcccc acacaactca tctacctcac 361 ctcagaaggc agaagaaggt gggcgacaga gtggcgagtc cttgtctagt acagccctgg 421 gaactcctga acggcgcaag ggcagtttag ctgatgttgt tgacaccttg aagcagagga 481 aaatggaaga gctcatcaaa aacgagccgg aaggctctca ttaactttca agtggaaaca 541 aacaagtatt ttggcaatac taaacgtaaa gtatttccag tgtttaattc acttcaggac 601 aatcacatat aaaaataaag cttatctaaa tcttaaaaaa aaaaaaaaaa aa //