LOCUS BC014921 4096 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 15, mRNA (cDNA
clone MGC:17887 IMAGE:3907610), complete cds.
ACCESSION BC014921
VERSION BC014921.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4096)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40789228.
FEATURES Location/Qualifiers
source 1..4096
/db_xref="H-InvDB:HIT000050606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17887 IMAGE:3907610"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4096
/gene="SFRS15"
/gene_synonym="DKFZP434E098"
/gene_synonym="SCAF4"
/gene_synonym="SRA4"
/db_xref="GeneID:57466"
/db_xref="HGNC:HGNC:19304"
CDS 404..3847
/gene="SFRS15"
/gene_synonym="DKFZP434E098"
/gene_synonym="SCAF4"
/gene_synonym="SRA4"
/codon_start=1
/product="splicing factor, arginine/serine-rich 15"
/protein_id="AAH14921.1"
/db_xref="GeneID:57466"
/db_xref="HGNC:HGNC:19304"
/translation="MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVV
QIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLC
PSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVK
VSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPA
LDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEE
SKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQ
HQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQ
PFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRS
GSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCST
TLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRG
NYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSD
TLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQV
PPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP
PGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAES
GDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGL
IPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGP
FVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQ
PPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDR
REWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAG
GNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSAAEAP
R"
BASE COUNT 1119 a 1153 c 959 g 865 t
ORIGIN
1 gcgggccgct gccgccatcc cgctggagag agggagagag aggcccgccc gctcgccggc
61 cgggccagtg tgagccagtg cgtgagggcg cggggggccg tgtcagcgag acgcagagcg
121 cagccgccac caccaaacgg acatgttgaa gaccagcgct gccgccgcct ccttttcctc
181 atcctgcgaa cgggactgag agggggcccg ccacctctcc gcctctgcct cggccgcccg
241 cctcgccgct tcgggcgcag cctcttcctg cccgggcctc ggactccgcc gctcgtcgcc
301 tccccccggc caccaggccc ggctggtttc ccagccccgc tccgccgcgg cgcgaggtct
361 atgtgaccgg cgggcccgga gcagccgccg ccgcagcgcg aacatggacg ccgtcaacgc
421 cttcaaccag gagctctttt cgcttatgga tatgaaacct cccatctcta gagccaagat
481 gattctcatc actaaagctg ctattaaagc tattaagctt tataagcatg tagttcaaat
541 agtagaaaag ttcatcaaaa agtgtaaacc agaatacaag gttccgggat tatatgtaat
601 tgactcaatt gtgcgacagt ctcgtcatca gtttggaact gataaagatg tttttgggcc
661 aagattctct aaaaacataa ctgccacatt ccaatattta tatctttgtc catctgaaga
721 taagagtaaa atagttcgtg tgctgaacct ttggcaaaaa aatggagtgt tcaaaattga
781 aattattcaa cctcttttgg acatggcagc gggaaccagt aatgcagccc cagtagcaga
841 aaatgttacc aataatgaag gctcacctcc acctccagta aaagtttctt ctgaacctcc
901 cacacaagcc actccaaact ccgtcccagc tgtaccacag ttgcccagct ctgatgcttt
961 tgctgctgtg gctcagctgt ttcagacaac tcaaggccaa cagcttcagc agatccttca
1021 gacttttcaa cagcctccaa aaccacagtc tcctgccctt gacaatgctg tgatggctca
1081 ggttcaggct atcacagctc agttaaagac aactcctaca caaccatctg aacaaaaagc
1141 tgctttcccc ccacctgaac agaaaactgc atttgacaag aagttgcttg atagatttga
1201 ctatgatgat gagccagaag ctgtggaaga atcaaagaaa gaggatacca ctgccgtcac
1261 cacgacagca cctgctgccg cagtaccccc tgcacccacc gccaccgtgc ctgctgctgc
1321 tgcacccgct gctgcctctc ctcctcctcc acaggcacca tttggctttc ctggagatgg
1381 catgcagcag ccagcataca cacagcatca aaatatggat cagtttcagc cacgaatgat
1441 gggaatacaa caggatccaa tgcaccatca ggttccactt cctcctaatg gacaaatgcc
1501 aggatttgga cttcttccta cacctccatt tcctcccatg gctcagcctg tgattcctcc
1561 aactccacca gtgcagcagc ctttccaagc ttcttttcag gcacaaaatg aaccacttac
1621 acagaagccg catcagcagg aaatggaagt agaacaacct tgtattcaag aggttaagcg
1681 acatatgtct gataacagaa agtcaagatc taggtcagca tccaggtcac caaaaaggag
1741 gcgatctaga tctggttcta gatctcgaag gtctcggcat cgacgttctc gatctcggtc
1801 cagggataga cgccgacatt ctccccgatc tcgatctcaa gaaagacggg atcgagaaaa
1861 agagagagaa cgtcgacaaa aaggcctccc tcaagtgaaa ccggaaactg caagtgtttg
1921 cagtactacc ctctgggtgg ggcagctgga caaaagaact actcagcagg atgttgccag
1981 tctcttggaa gagtttggtc caattgaatc aattaatatg attcctccca ggggttgtgc
2041 ctatattgtt atggttcata ggcaagatgc ctatcgtgcc ctgcagaaac tgagccgagg
2101 aaactataaa gtgaaccaga aatccataaa gattgcctgg gccttaaaca aaggaataaa
2161 ggcagattat aagcagtatt gggatgtaga acttggtgtt acttatattc catgggacaa
2221 agtcaagcct gaggaactgg agagtttttg tgaaggagga atgttggaca gtgacacact
2281 taacccagat tggaaaggaa ttcctaagaa gcctgaaaat gaagttgctc aaaatggagg
2341 tgctgaaacc tcacacacag aaccagtatc acccatacct aaaccattac ctgtgcctgt
2401 ccctcctatt cctgttcctg cacctataac agtgccacct ccacaggtcc caccacatca
2461 accgggtcca cctgtagttg gtgctctcca gccgcctgct ttcacgcctc ctctgggaat
2521 accgcctcca ggctttggtc ctggtgttcc tcctccccct cctcctccac catttttgcg
2581 cccaggattc aacccaatgc atttaccacc aggttttctg cctcctggac ccccacctcc
2641 tataactcca ccagtatcca ttcctcctcc tcacactcca ccaataagca tcccaaactc
2701 tactatcgct ggtataaatg aagacactac aaaagactta tctattggaa atcccattcc
2761 aacagtggtg tctggggcta gaggaaacgc cgagtctggt gacagcgtga aaatgtatgg
2821 ctctgccgtg ccacctgctg cacccacgaa tctgcccacc cctcctgtaa cccagcctgt
2881 ttcacttctt ggcactcaag gagttgcccc tggtcctgta attggacttc aggcaccatc
2941 tactggtctt cttggcgccc ggcccggtct catcccactc cagcgccctc caggaatgcc
3001 cccacctcac ttacagcggt tccctttgat gccgccccgt cccatgccac cgcacatgat
3061 gcacagaggc ccaccgccag gaccaggggg ctttgcgatg cctccacctc atggaatgaa
3121 aggtcccttc ccaccgcatg gcccctttgt taggcctggt ggaatgccag ggctcggggg
3181 cccagggcca ggcccagggg gtcctgaaga cagagacgga aggcaacagc cgccgcagca
3241 gccacagcag cagccacagc cgcaggcgcc ccagcaacca cagcagcagc agcagcagca
3301 gccaccacca tcacaacagc ctccaccaac acagcagcag ccacagcagt ttagaaatga
3361 taacaggcag cagttcaatt caggtagaga ccaagaaagg tttggaagaa gatcttttgg
3421 aaatagggtg gaaaatgacc gggaacggta tgggaaccgt aatgatgata gagataatag
3481 taaccgtgac aggagagagt ggggaaggag gagccctgac cgggacaggc acagagactt
3541 ggaagagaga aatagacgct ctagtgggca tcgagacaga gagagagatt ctagagatag
3601 agagtctcgt agagagaagg aagaagcccg aggaaaggaa aagcctgagg tgacagacag
3661 ggcaggtggt aacaaaaccg ttgaacctcc cattagccaa gtgggaaatg tagacactgc
3721 ttcagaactt gagaaggggg tgtctgaggc tgcagtccta aagccttctg aagagttacc
3781 tgctgaggct acctcatccg ttgaacccga aaaggattct ggctcagcag cagaggctcc
3841 tcgttagaga ctggaatttg tgaaaatgtg acagtgacac ttcctggagt gtagagcttg
3901 aggtgtacag atgctgtatt atatccgctc ccgctgtact gcagccccgc gccagctggt
3961 ggggaactgt aagcaatttg attgcttccc ttctatttaa aaatagccac aaaataacaa
4021 aaaatactga aaatatgaat aaatattacc ctttttgctg taaaaaaaaa aaaaaaaaaa
4081 aaaaaaaaaa aaaaaa
//