LOCUS BC014913 3914 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens synaptotagmin-like 4, mRNA (cDNA clone MGC:17313
IMAGE:3908307), complete cds.
ACCESSION BC014913
VERSION BC014913.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3914)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: d Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18152766.
FEATURES Location/Qualifiers
source 1..3914
/db_xref="H-InvDB:HIT000036898"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17313 IMAGE:3908307"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3914
/gene="SYTL4"
/gene_synonym="SLP4"
/db_xref="GeneID:94121"
/db_xref="HGNC:HGNC:15588"
/db_xref="MIM:300723"
CDS 333..2348
/gene="SYTL4"
/gene_synonym="SLP4"
/codon_start=1
/product="synaptotagmin-like 4"
/protein_id="AAH14913.1"
/db_xref="GeneID:94121"
/db_xref="HGNC:HGNC:15588"
/db_xref="MIM:300723"
/translation="MSELLDLSFLSEEEKDLILSVLQRDEEVRKADEKRIRRLKNELL
EIKRKGAKRGSQHYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQESNGTWRC
KVCAKEIELKKATGDWFYDQKVNRFAYRTGSEIIRMSLRHKPAVSKRETVGQSLLHQT
QMGDIWPGRKIIQERQKEPSVLFEVPKLKSGKSALEAESESLDSFTADSDSTSRRDSL
DKSGLFPEWKKMSAPKSQVEKETQPGGQNVVFVDEGEMIFKKNTRKILRPSEYTKSVI
DLRPEDVVHESGSLGDRSKSVPGLNVDMEEEEEEEDIDHLVKLHRQKLARSSMQSGSS
MSTIGSMMSIYSEAGDFGNIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKR
SNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHG
RFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAESPTGLPSHKGELVVSLKYIPA
SKTPVGGDRKKSKGGEGGELQVWIKEAKNLTAAKAGGTSDSFVKGYLLPMRNKASKRK
TPVMKKTLNPHYNHTFVYNGVRLEDLQHMCLELTVWDREPLASNDFLGGVRLGVGTGI
SNGEVVDWMDSTGEEVSLWQKMRQYPGSWAEGTLQLRSSMAKQKLGL"
BASE COUNT 1082 a 788 c 1008 g 1036 t
ORIGIN
1 cacagcgctc ggccgtcgag cggggtcgct aacccgcact ctcttcggac ctacgacatc
61 gcggcttctc tggcgttggc cagtcagcca cagggaacta gtaaaaaaag aaaaagaaaa
121 aataaagtga aagaggcgtg ttgtctagtt tcaaaggaga ggagagaaga gactgagtcg
181 ccctgtgttg cccaggctgg tcttgaactc ctaggctcaa gagatcctcc tgcctcagcc
241 tcccaaagtg ctgggattac aggcaactct ggtagctctc cttgtctggt tgttttgaag
301 aaagaagagt agaagaaaaa gttgagtaaa tcatgtcgga gttactggac ctttcttttc
361 tgtctgagga ggaaaaggat ttgattctca gtgttctaca gcgagatgaa gaggtccgga
421 aagcagatga gaaaaggatt aggcgactaa agaatgagtt actggagata aaaaggaaag
481 gggccaagag gggcagccaa cactacagtg atcggacctg tgcccggtgc caggagagcc
541 tgggccgttt gagtcccaaa accaatactt gtcggggttg taatcacctg gtgtgtcggg
601 actgccgcat acaggaaagc aatggtacct ggaggtgcaa ggtgtgcgcc aaggaaatag
661 agttgaagaa agcaactggg gactggtttt atgaccagaa agtgaatcgc tttgcttacc
721 gcacaggtag tgagataatc aggatgtccc tgcgccacaa acctgcagtg agtaaaagag
781 agacagtggg acagtccctc cttcatcaga cacagatggg tgacatctgg ccaggaagaa
841 agatcattca ggagcggcag aaggagccca gtgtgctatt tgaagtgcca aagctgaaaa
901 gtggaaagag tgcattggaa gctgagagtg agagtctgga tagcttcaca gctgactcgg
961 atagcacctc caggagagac tctctggata aatctggcct ctttccagaa tggaagaaga
1021 tgtctgctcc caaatctcaa gtagaaaagg aaactcagcc tggaggtcaa aatgtggtat
1081 ttgtggatga gggtgagatg atatttaaga agaacaccag aaaaatcctc aggccttcag
1141 agtacactaa atctgtgata gatcttcgcc cagaagatgt ggtacatgaa agtggctcct
1201 tgggagacag aagcaaatcc gtcccaggcc tcaatgtgga tatggaagag gaagaagaag
1261 aagaagacat tgaccaccta gtgaagttac atcgccagaa gctagccaga agcagcatgc
1321 aaagtggctc ctccatgagt acgatcggca gcatgatgag catctacagt gaagctggtg
1381 atttcgggaa catctttgtg actggcagga ttgccttttc cctgaagtat gagcagcaaa
1441 cccagagtct ggttgtccat gtgaaggagt gccatcagct ggcctatgct gatgaagcca
1501 agaagcgctc taacccatat gtgaagactt accttctgcc tgacaagtcc cgccaaggaa
1561 aaagaaaaac cagcatcaag cgggacactg ttaatccact atatgatgag acgctgaggt
1621 atgagatccc agaatctctc ctggcccaga ggaccctgca gttctcagtt tggcatcatg
1681 gtcgttttgg cagaaacact ttccttggag aggcagagat ccagatggat tcctggaagc
1741 ttgataagaa actggatcat tgcctccctt tacatggaaa gatcagtgct gagtccccga
1801 ctggcttgcc atcacacaaa ggcgagttgg tggtttcatt gaaatacatc ccagcctcca
1861 aaacccctgt tggaggtgac cggaaaaaga gtaaaggtgg ggaaggggga gagctccagg
1921 tgtggatcaa agaagccaag aacttgacgg ctgccaaagc aggagggact tcagacagct
1981 ttgtcaaggg atacctcctt cccatgagga acaaggccag taaacgtaaa actcctgtga
2041 tgaagaagac cctgaatcct cactacaacc atacatttgt ctacaatggt gtgaggctgg
2101 aagatctaca gcatatgtgc ctggaactga ctgtgtggga ccgggagccc ctggccagca
2161 atgacttcct gggaggggtc aggctgggtg ttggcactgg gatcagtaat ggggaagtgg
2221 tggactggat ggactcgact ggggaagaag tgagcctgtg gcagaagatg cgacagtacc
2281 cagggtcttg ggcagaaggg actctgcagc tccgttcctc aatggccaag cagaagctgg
2341 gtttatgagt ccctgtcctc ttctgcaggt ccagccctgg cgagggcagg tcagaggaag
2401 tgaagaaatc aagagcaaag atttataatt taatgtgtat gtgtgtatgt gtgtatgtgt
2461 gtgtgtgtgt gtgtgtgtgt gtgtgtgtac aaacatgtat tttctgcaaa tctcattatg
2521 ctggctagag tgatgcagac ttgttcttct ttttaaagca gtctcaagaa taagcatttc
2581 tttaaaatgt ttctgtgtat aatctagttt attttcagag tccatttttt cttatgtctt
2641 tataaggttc acttaactta aaaacagctt ttaaaacaac tttttatctt ctgtcttgct
2701 atcattgttc ctacttccct aggaagccct ggctaccttt cgcattagga ccagtctggg
2761 ttttaaggct ctgggaagca gggttggtta gtaaagacag gaatgttggg gagaggtgag
2821 tagttccttc ctctttctcc tctccaattt atgcttttaa cttattttct acctggataa
2881 acttctggaa cttggctttt aaatttaact tttctagttt ttaagcagtt tccaccttgc
2941 tttggtctaa tgcttttctt tgaaatgcta acagaattcc caagcttttt ccagttctag
3001 atatctttac tagacctttg ggggactctt ataatggagc tgcttttgaa aagcacttta
3061 attagataat gtattttgac taaatcacga ggatgcccag tgagagcttc tagctgatct
3121 cagaggacca gagtgactga gggtaaagtg tctcacagcc catgctgaat tttctgcatt
3181 ttaaactgat actgcagtca ttggagagag agctcctcat ttctcgaatg aaagatgaga
3241 tatattcatc ctcatgtacc acatctgtct tagtgtttgc gtctggggtg tgttatcaaa
3301 cagagcatgg tctacatccc actgtgtcaa ccagaagagc caagtgttat ctcaattggc
3361 ccagtgtttc tccaggctgg ggactgttaa gggctctaag ggaatgtaga cagagtctcc
3421 ctgttattct gacttcctgc ttgatgagct ttcagttcct gtttttgcta ttgtttccta
3481 aatttgacct acatattaca tgggtgtagt gtgttgaggc ttttcaaaga agggtctagt
3541 gagctaagtt tcatcttctg gtactcattg atcaaactga cctttctatt ctcataagcg
3601 tttctaccca aagttgtgtg tggaaggagt gtatagcaga gaggaaatcc ctttcaacag
3661 agtcagctgc taactgattt cctataagca cactggatta agggcagcca cagtggtttc
3721 tactgtatgt atgaaccgaa tggaggaatg ttttcaaaga ttgatttggt gtggattgca
3781 attgtaatgg aaggcataac ttgggatccc gggctgtaac ttgctctttt gtttcccacc
3841 cccctgacat gtatgtgtgc tttaataaag ctttctcact tgtcaaaaaa aaaaaaaaaa
3901 aaaaaaaaaa aaaa
//