LOCUS BC014859 3981 bp mRNA linear HTC 10-APR-2007
DEFINITION Homo sapiens sine oculis binding protein homolog (Drosophila), mRNA
(cDNA clone IMAGE:3875312), with apparent retained intron.
ACCESSION BC014859
VERSION BC014859.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3981)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3981)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: p Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62243926
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3981
/db_xref="H-InvDB:HIT000088487"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3875312"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1044 a 1088 c 980 g 869 t
ORIGIN
1 gacggcggcg gcatccccga gactctccgc actatcctta cccgtgacag ccactgacgt
61 cctccgccgc tagaagagac cccgcttctc ggcgcctgcc ctccccctcg cggctcggtc
121 cggccccgcc agcaccgcta cctccgccag cctcgccacc atcagcacca cctccaccgc
181 cgccgccgcc gccaccacca ccgccggcgg cggcagcagc catttcatct ccacagaaac
241 cagacacaaa aacatggcag aaatggagaa agaagggaga cctcccgaaa ataaacggag
301 caggaagccg gctcacccag tgaaaaggga gatcaatgag gagatgaaga actttgcaga
361 aaacaccatg aatgaactcc ttggctggta tggctatgat aaggttgaat taaaagatgg
421 tgaggatatt gaattcagga gctaccctac agatggggag agccggcagc acatttctgt
481 tctcaaagaa aattctttgc caaaaccaaa attacccgag gacagtgtta tttcaccata
541 caatataagc acaggctatt cagggcttgc cactggaaat ggactcagtg actcacctgc
601 agggtcaaag gatcatggca gtgtgcccat tattgtacct ttaattccac cacctttcat
661 aaagccacca gcagaagatg atgtgtcaaa tgtacaaata atgtgtgcct ggtgccagaa
721 agtgggaatc aagcgctatt ccctgagtat gggaagtgag gtgaaaagct tctgcagcga
781 gaagtgcttt gcggcctgcc gacgagccta cttcaagaga aataaggcta gagatgaaga
841 tggacatgct gaaaattttc cccagcagca ctatgctaag gaaactccaa ggcttgcctt
901 caagaataac tgcgaactac ttgtatgtga ctggtgtaag cacataagac acacaaaaga
961 atacctggat tttggggacg gggaaagaag gcttcagttc tgcagtgcaa aatgtctcaa
1021 tcaatacaaa atggacattt tctacaaaga gacccaggcc aatcttccag ctgggctgtg
1081 cagcacatta caccctccca tggaaaataa agcagaaggc accggggtgc agctgctcac
1141 tccagactct tggaatatcc cgctaacaga tgctcggagg aaggccccct ccccggtggc
1201 tacagctggc caaagccagg gccctggccc gtcggcgtcc accaccgtct ctccatctga
1261 cactgccaac tgctctgtca ctaaaatccc cacgccagtg cccaagtcca tccccatcag
1321 cgagactcca aatatccctc ctgtctccgt ccagccacct gctagcatcg ggcctcccct
1381 tggcgtcccg cctcggagcc ctcccatggt gatgaccaac cgcggcccgg tgccgctgcc
1441 catcttcatg gagcagcaga tcatgcagca gatccgcccg cccttcatcc gcgggcctcc
1501 gcaccatgcc tccaacccca acagccccct gtccaacccc atgcttcccg gcatcgggcc
1561 cccgcccggt ggccccagaa acctgggccc cacttccagc cccatgcacc ggcccatgct
1621 atcgccccac atccaccccc cgcgcccccc aagaagctgc tgtcgcctga ggaaccggcg
1681 gtgagcgagc tagagtcggt caaggagaat aactgtgctt ccaactgcca cctggacggg
1741 gaggcggcca aaaagctgat gggcgaggag gccctggcgg ggggcgacaa gtcagacccg
1801 aaccttaata accccgcgga cgaggaccat gcctatgctc tgcggatgct gcccaagacc
1861 ggctgcgtga tccagcctgt gccaaaaccc gcggagaagg ctgccatggc accgtgcatc
1921 atctcctcgc ccatgctcag cgccgggcct gaggacctgg agccgccgct caaaaggagg
1981 tgcctccgaa ttagaaatca gaataagtaa aaggtttgta tgtccgccgg gcgctcctcc
2041 acaccagcca gtgcacctct ccttacttct gacaaggcag aggggagagt tgtaattata
2101 gtcatgattt taccgtgtgt gttttatatt gcacacggtg tggtcacgct atcaacattc
2161 tgagccagca gctctgatgc tgagttgttc agtagcatca ttcccatttt acagccgagg
2221 aaactgagcc acagcatgtg agtgccaagc cccgggtcac ttacttgagg ggagagctca
2281 gtctccaacc tgtcatgaaa tattgtctct ccaattacac tttattatca tgctcatctc
2341 cgtaaatcac cctattggag aagaggagga tggggggagg gagaagagat taacttggga
2401 cacctaaatg tgtgatcatg aggttgcagg gcagtggtga aatgtccagt gaacccatga
2461 gctgggccac ctactaaata gagctggttg cctcattggc agaatgtcac caaattttct
2521 tgataaggac gggattccat ttgtaaagtg agaatgaaac ctaactctta catgcatatg
2581 tcagctgaac ccaggccact gagtcctatt tgcctggcag ggtgtctttc ctgttcatgg
2641 ggtctccttc ctgcagtttg gcaccaagca gcatccccca gggtaggcct caagcgtcac
2701 tgaccagctt tgctctctcc cccttttggg gcccagcggc ttagctgatg agttgctcac
2761 ctttgcaggt aatgggaggc ttcgataggg aagagggtgg cattgctaaa gtgagtgaca
2821 ctgcacatct ctgacctcat agacagactc ctgcccaatg ccaagtgagc cgccaagagt
2881 gagttaaatt tttcaatatt gggaagggga actaacatgt gtgcctgtca taggcagagg
2941 tggcctcatt tgctcctcct gccaattctg gtggaatagg catcatctgt atctcaccaa
3001 ggaggcagat gaagcttaga tactgtgccc gaagcagagc tggtacgtgg ggaagccgta
3061 ttcaactcag gcctgttgga cacagcccaa gctctcccgt ctatccaagc gggcatcaaa
3121 caggccaaaa ttcagttgag tttatcaact tcttatggag aggaagagga gagatgagca
3181 tttattgagc acctaacttg tacactgctc cttccaggga ctagggagat acaaaggtaa
3241 atgatggcgt gcccccatct ggtgggagtg caaactccag gaggaaggaa gcgggggcca
3301 ggagagtgga tctcgtaaga tgaataattg ctcacatttg tatgcaggct gtcttctaag
3361 tgtttttcgg tagtatttat ttggatctgg gtccatagga caattatcgt cttcatttta
3421 ttgatgagga aaccaagaca gagacattaa agtaacttgc ccaagatttt accaaattag
3481 cagagttgag atgcaaatcc aggctgtctg actccagagc tgcatttttt aaaaaaccac
3541 tgtaggagaa taggctaatt agtttcttta ttaccctaca tactaaaatt gttttaccca
3601 cctcagtggg taaaacaacc ctcagttgtc ataggggaaa gtttcttaaa aaacaaacaa
3661 aaactaagtc tacctcctaa cttctctaag tgttcagaca gttgaattct tgtttctgca
3721 gcaccaacaa gcctaaatta ccaacccatt actccacagt gggaaataca aacgtggagc
3781 acagcacttg ctgtggtgtg tccagtccct ggtctctaag ttgggcccct agcatagcca
3841 ggagattgct tgggaagcac agaccagagc aaggagactt gtcagttgtg gaagaaaggt
3901 ttctcagcca ccatcgttcg aggtttcctt ttcctctgat ggctttgcca gtagaggaag
3961 aatactaaaa aaaaaaaaaa a
//