LOCUS BC014851 2101 bp mRNA linear HUM 17-NOV-2006 DEFINITION Homo sapiens LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, mRNA (cDNA clone MGC:22145 IMAGE:4453156), complete cds. ACCESSION BC014851 VERSION BC014851.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2101) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2101) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 28 Row: a Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58696421. FEATURES Location/Qualifiers source 1..2101 /db_xref="H-InvDB:HIT000036872" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22145 IMAGE:4453156" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_89" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2101 /gene="LFNG" /gene_synonym="SCDO3" /db_xref="GeneID:3955" /db_xref="HGNC:HGNC:6560" /db_xref="MIM:602576" CDS 89..841 /gene="LFNG" /gene_synonym="SCDO3" /codon_start=1 /product="LFNG protein" /protein_id="AAH14851.1" /db_xref="GeneID:3955" /db_xref="HGNC:HGNC:6560" /db_xref="MIM:602576" /translation="MTPGRCCLAADIQVETFIFTDGEDEALARHTGNVVITNCSAAHS RQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLD RPIQAMERVSENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAERIRLPD DCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMFENKRNAVHVK GPFSVEADPSRFRSIHCHLYPDTPWCPRTAIF" BASE COUNT 399 a 579 c 628 g 495 t ORIGIN 1 ggagggtttt gctctttgtg tgggtgtgtg agtggctatg atcctagttg tccagctgct 61 gcgtggagaa taagtaaagc aggtctgaat gacaccaggt cgctgctgtc ttgcggctga 121 cattcaggta gagacgttca tcttcactga cggggaagat gaggccctgg ccaggcacac 181 gggcaacgtg gtcatcacaa actgctcggc cgcccacagc cgccaggcgc tgtcctgcaa 241 gatggccgtg gagtatgacc gcttcatcga gtccggcagg aagtggttct gccacgtgga 301 cgatgacaac tacgtcaacc tgcgggccct gctgcggctg ctggccagct acccgcacac 361 gcgggacgtc tacgtcggca agcccagcct ggacaggccc atccaggcca tggagcgggt 421 cagcgagaac aaggtgcgtc ctgtccactt ctggtttgcc acgggcggcg ctggcttctg 481 catcagccgt gggctggctc tgaagatgag cccgtgggcc agcgggggtc acttcatgaa 541 tacggctgag cggatccggc tgcctgatga ctgcaccatc ggctacatcg tggaggccct 601 gctgggtgtg cccctcatcc gcagcggcct cttccactcc cacctggaga acctgcagca 661 ggtgcccacc tcggagctcc acgagcaggt gacgctgagc tacggtatgt ttgaaaacaa 721 gcggaacgcc gtccacgtga aggggccctt ctcggtggag gccgacccat ccaggttccg 781 ctccatccac tgccacctgt acccggacac accctggtgt ccccgcactg ccatcttcta 841 gtggccatgg ctgagaccca atccctgggc gcccctggta tccaaagggc ccagggaccc 901 tgttgcgctg ccctggcctc ggcattcgag gctcccctag ggccgtgcct gtgcgtgtgc 961 gtgtgcatgt gcgtgtgtgt gtgtgtgtac tgcatgccca cccgggtagc aggctgctgg 1021 gcagttctgc tctgtggagg ggcgggcacc agcgccactt atgtgcctct gctccgaggg 1081 ccagtgggct gcagggcctg cttggaggaa ggatttgtgt gtcggaggcc actccgaggg 1141 caattctgtt aggatttttg gatctttcta cagctacggg gctccgggct actttgcagg 1201 gatgcgatgc gtaggtgcct ttctcttcct gctgaccaca agctctgtgc tgggggtacc 1261 tgtgccctga agtcctggcc cctgtgtcat agccccaagt acgactcact gagccatgct 1321 cattgcaggg gaggctgggt ctgggggtgc gtgacccaat ccccttcctc ctggcctgga 1381 cgctgtggct taagagtaac agcagccacc gcccagttcc agtggcccca cgaagccccc 1441 agtggctggc tgtccagctg ggcaaacagt ggcacccctc ccagctcttc tgagtgggga 1501 gtcttccagg cctcctcaga ggtcttccct ttgcctcccc aggacagggt gagtcagagc 1561 tcagcattta atctcctctc caaagtagag agcaagtcgc ccacagtggg cgtgtctgta 1621 aatattgtga cagtattttt ttactgtgct gttttttttg aaaggggatg ggtaaaaagt 1681 agggtgttct tgttttttgc ttgggagggt gggggtgggg gagggtctta ttttatctta 1741 tcttttctgt ggatcagaaa aaacagaagc caaactcggg gtcatctttg tttttaaagc 1801 tgaagtggga ctgtctggca ctctgtgtat ttatgcgttc cagcatctgg aacctcccat 1861 ccctgccctc ctcctgtgta gctgccacct ccccgctggg cccagcatgg ctcacctgtc 1921 ccgtgggctg tgtttcttgt tgtttttctc tttgcaaaga catagctagg aaagcgaatg 1981 ataagggaaa agttctcagg gaattgaagt gttgttgcta tggtgacgtc cttttgctgt 2041 gaataaaggt gctctttgca gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2101 a //