LOCUS BC014795 3248 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus transmembrane protein 63a, mRNA (cDNA clone MGC:11687
IMAGE:3961992), complete cds.
ACCESSION BC014795
VERSION BC014795.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 3248)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3248)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Gilbert Smith, Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 17 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450146
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..3248
/organism="Mus musculus"
/mol_type="mRNA"
/strain="FVB/N"
/db_xref="taxon:10090"
/clone="MGC:11687 IMAGE:3961992"
/tissue_type="Mammary tumor. Metallothionien-TGF alpha
model. 10 month old virgin mouse. Taken by biopsy."
/clone_lib="NCI_CGAP_Mam1"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3248
/gene="Tmem63a"
/gene_synonym="MGC11687"
/gene_synonym="MGC25803"
/gene_synonym="Tmem64a"
/db_xref="GeneID:208795"
/db_xref="MGI:MGI:2384789"
CDS 30..2444
/gene="Tmem63a"
/gene_synonym="MGC11687"
/gene_synonym="MGC25803"
/gene_synonym="Tmem64a"
/codon_start=1
/product="transmembrane protein 63a"
/protein_id="AAH14795.1"
/db_xref="GeneID:208795"
/db_xref="MGI:MGI:2384789"
/translation="MTSSPFLDPWPSKAVFVRERLGLGERPNDSYCYNSAKNSTVLQG
VTFGGIPTVLLLDVSCFLFLILVFSIIRRRFWDYGRIALVSEAGSEARFQRLSSSSSG
QQDFENELGCCPWLTAIFRLHDDQILEWCGEDAIHYLSFQRHIIFLLVVISFLSLCVI
LPVNLSGDLLGKDPYSFGRTTIANLQTDNDLLWLHTVFSVIYLFLTVGFMWHHTRSIR
YKEESLVRQTLFITGLPREARKETVESHFRDAYPTCEVVDVQLCYSVAKLIYLCKERK
KTEKSLTYYTNLQAKTGRRTLINPKPCGQFCCCEVQGCEREDAISYYTRMNDSLLERI
TAEESRVQDQPLGMAFVTFREKSMATYILKDFNACKCQGLRCKGEPQPSSYSRELCVS
KWTVTFASYPEDICWKNLSIQGVRWWLQWLGINFSLFVVLFFLTTPSIIMSTMDKFNV
TKPIHALNNPVISQFFPTLLLWSFSALLPSIVYYSTLLESHWTRSGENRIMVSKVYIF
LIFMVLILPSLGLTSLDFFFRWLFDKTSSETSIRLECVFLPDQGAFFVNYVIASAFIG
SGMELLRLPGLILYTFRMIMAKTAADRRNVKQNQAFEYEFGAMYAWMLCVFTVIMAYS
ITCPIIVPFGLIYILLKHMVDRHNLYFAYLPAKLEKRIHFAAVNQALAAPILCLFWLF
FFSFLRLGLTAPATLFTFLVVLLTILACLLYTCFGCFKHLSPWNYKTEESASDKGSEA
EAHVPPPFTPYVPRILNGLASERTALSPQQQQTYGAIRNISGTLPGQPVAQDPSGTAA
YAYQES"
BASE COUNT 698 a 903 c 843 g 804 t
ORIGIN
1 gaaagagcaa cattgggaga gaaggcacaa tgaccagctc cccgttcctg gatccctggc
61 cgtccaaggc tgtgtttgtc cgtgagcgcc tgggtcttgg cgaacgtccc aatgactcct
121 attgctacaa ctcagccaaa aacagcactg tgctccaagg ggtcaccttt ggaggcatcc
181 ccactgtcct gctcttagat gtcagttgct ttctgtttct aatcctggtg ttttccatca
241 taaggagaag attctgggat tatggccgca tagccctggt atcagaagca ggcagtgagg
301 ccaggttcca gagactgtcc tcttcctcct cagggcaaca agactttgaa aacgagctgg
361 gatgctgtcc ttggctgacg gccatcttcc gcctgcatga cgaccagatc ctggagtggt
421 gcggagagga cgccatccac tacctgtctt ttcagaggca catcatcttc ctgctggtgg
481 tgatcagctt cttgtccctg tgtgtcatct tgcctgtcaa cctctcggga gacttgctgg
541 gtaaagaccc ttacagcttt gggaggacaa cgatagctaa cctgcagact gacaatgacc
601 tcctctggct gcacactgtc ttcagcgtca tctacctctt cctcacggtg ggcttcatgt
661 ggcatcacac acggtccatc agatacaaag aggagagtct ggtgagacaa accttgttca
721 tcacaggact ccccagagaa gccagaaagg agactgtgga gagccacttc cgagatgcgt
781 atcccacgtg tgaggtggtg gatgtccagc tgtgctacag cgtggctaag ctgatctacc
841 tgtgcaaaga gagaaagaag accgagaaga gccttaccta ttacacaaac ctgcaggcga
901 agacaggccg acggaccctc atcaacccca agccttgtgg ccagttctgc tgctgtgaag
961 ttcagggttg tgagcgggaa gatgctattt cttactacac tcgaatgaat gacagcctgc
1021 tggagaggat cacagccgaa gagagccggg tccaggacca gcccctggga atggcctttg
1081 tcaccttccg tgagaagtcc atggctacct acatactgaa agacttcaat gcctgcaagt
1141 gccagggcct tcggtgcaaa ggggagcccc agccatcctc ctatagcaga gagctctgtg
1201 tctccaagtg gacggtcact tttgcctcct atcctgagga catctgctgg aagaacctct
1261 ccatccaggg cgttcgctgg tggctccagt ggctgggtat caacttctct ctgtttgtgg
1321 tgctgttttt cctgaccacg ccctccatca ttatgtctac catggacaag ttcaatgtta
1381 ccaaacccat ccacgcactg aataaccccg tcatcagcca gttcttcccc acactcctgc
1441 tgtggtcctt ctctgcgctg cttccgtcca ttgtctacta ctccacgctg ctggagtccc
1501 actggacaag gtcaggggaa aaccggatca tggtgtcgaa ggtctacata tttttgatct
1561 tcatggtgct gatcctgccc tccctcggtc tcaccagctt ggatttcttc ttccggtggc
1621 tctttgacaa aacttcctcg gaaacctcaa tcaggctaga gtgtgtcttc ctgccagacc
1681 agggtgcctt ctttgtgaac tacgtcatcg cctcagcctt catcggcagt ggcatggagc
1741 tgttgcgcct gcccggcctc atcctctata ccttccgcat gatcatggcc aagacggccg
1801 ctgaccgcag gaatgttaag cagaaccagg cttttgaata cgagtttgga gccatgtatg
1861 cgtggatgct gtgtgtcttc accgtcatca tggcttacag catcacctgc cccattatcg
1921 tgccctttgg cctcatctac atcctgctta agcacatggt ggaccggcat aacctctact
1981 tcgcttacct cccggctaaa ctggagaaga ggatccactt cgccgccgtg aaccaggccc
2041 tggccgcccc catcctctgc ctcttctggc tcttcttttt ctccttcctc cgtctgggtc
2101 tgacggcccc ggccacgctc ttcaccttcc tggttgttct gctcaccatc ctggcctgcc
2161 tgctgtacac ctgctttgga tgcttcaagc acctcagccc atggaactac aagacagaag
2221 aatcagctag tgacaaagga agcgaagccg aggcccacgt gcccccgcca ttcacaccct
2281 atgtgcctcg gattctgaac ggtttggcct cagagaggac agcgttatcc ccacagcagc
2341 agcagaccta cggtgccatc cgtaacatca gtgggactct tcctgggcag cccgtggctc
2401 aagatcctag tggcactgcg gcttatgcct accaggaatc ctgagagtgg acaagctggt
2461 ctggcaggct gggagcatct aggaataccg agggacacaa ggggctagag ccccagacag
2521 gctcttgagg gttttgctgc ttaaaacccc cgtattgtga gaagaggaaa ccagcgggtc
2581 gtggggctct gggtaaccgg gctgagggta tccatccggt ggggctgctg tccctgggag
2641 ccatctgtaa ggtttctttt ctggtcccag tgtggggaac atttacagct ccctcttgtg
2701 gtcatctgag gatatgcact tttattcccc catacactgc tcaggatgct ctctgtagtg
2761 agcatggtgt atgtccctag tggtttgtgg ccaagatcat gtgttgggct tttgccttta
2821 gggagatcat atttggggac ttctggttga tggggagatg cgtccaggaa agacttagtc
2881 cctctgagcc ctggaacact gcttagcctt ctgcaagctg atgaatagcg catcagttgg
2941 gtctgagatg gaggccatgt ggggccctac agtactgtcc tgcctgcagt cccttttcag
3001 ggatccatgg attagctgta gggaccgggg aataccttgt tcttgttgat ggcagcaggg
3061 cagcaggctc atgcccactg gtttgtagct gcctcctgct gtgtttccgg gtttttgtat
3121 catgttgcct gaatctgggc tgtgactggg taaccccaca gcaggtgggg acatgagaac
3181 cattaataaa gtacccactg ggctggtggt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aaaaaaaa
//